Table 2

Haplotype analysis results derived using WHAP (haplotypes > 2% frequency).

Haplotype

Name

Frequency


AGGC(-)G

H2

0.230

GGGC(+)A

H1b

0.196

AAGT(+)G

H1c

0.100

AGGC(+)A

H1e

0.094

AAGC(+)A

H1d

0.073

GAGC(+)A

H1i

0.052

AGAC(+)G

H1l

0.052

AGGC(+)G

0.046

AGAC(+)A

H1h

0.040

AAGC(+)G

H1u

0.033

AAAT(+)G

0.031

GAAC(+)A

0.029

GAGT(+)G

0.025


The names of the haplotypes are as per Myers et al., (2005) [5]. Unnamed haplotypes were inferred only in this dataset. The status at del-In9 is represented by (-) for the deletion and (+) for the insertion.

Mukherjee et al. BMC Genetics 2007 8:3   doi:10.1186/1471-2156-8-3

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