|
Comparison of results of affected sib pair test (ASP) and transmission disequilibrium test (TDT). The chromosome positions and single-point levels of significance are shown for all significant markers in the genome scan. The significant p-values (1%) are in bold. |
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| Chromosome |
Marker |
Position (cM) |
P-value, ASP |
P-value, TDT |
|
|
||||
| SSC1 |
SW1515 |
0 |
0.05 |
0.07 |
| SW1332 |
20 |
0.05 |
0.005 |
|
| S0331 |
60 |
0.05 |
0.05 |
|
| SSC2 |
SW1686 |
45 |
0.01 |
0.23 |
| SW834 |
65 |
0.001 |
0.86 |
|
| SW2134 |
75 |
0.002 |
0.17 |
|
| SWR2157 |
85 |
0.001 |
0.90 |
|
| SWR308 |
125 |
0.01 |
0.06 |
|
| SSC4 |
S0227 |
0 |
0.05 |
0.49 |
| S0301 |
20 |
0.01 |
0.53 |
|
| S0214 |
70 |
0.05 |
0.61 |
|
| SSC5 |
SW963 * |
80 |
0.01 |
0.005 |
| SSC6 |
SW1355 * |
60 |
0.11 |
0.0002 |
| S0003 |
80 |
0.05 |
0.18 |
|
| SSC7 |
TNFB |
55 |
0.05 |
0.10 |
| S0212 |
135 |
0.05 |
0.05 |
|
| SSC12 |
SW2180 |
105 |
0.05 |
0.18 |
| SSC13 |
S0223 |
60 |
0.01 |
0.40 |
| S0075 |
65 |
0.01 |
0.93 |
|
| SSC15 |
SW919 |
20 |
0.001 |
0.02 |
| SW1118 |
35 |
0.05 |
0.01 |
|
| SSC17 |
SW1891 |
0 |
0.01 |
0.01 |
| SWR1120 |
10 |
0.05 |
0.74 |
|
| SW2441 |
25 |
0.05 |
0.11 |
|
| S0332 |
70 |
0.05 |
0.01 |
|
| SSC18 |
SW1984 |
30 |
0.05 |
0.17 |
| SW1682 |
45 |
0.01 |
0.72 |
|
| SSCX |
SW1522 |
50 |
0.006 |
0.28 |
| SW259 |
70 |
0.003 |
0.53 |
|
|
* Markers with chromosomewise significance of p < 0.01 from the TDT analyses | ||||
Grindflek et al. BMC Genetics 2006 7:25 doi:10.1186/1471-2156-7-25 |
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