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Penelope Webb, PhD

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Helen Whitaker




BMC Genetics, Volume 7

 

 

 

Research article
Polymorphism analysis of six selenoprotein genes: support for a selective sweep at the glutathione peroxidase 1 locus (3p21) in Asian populations
Charles B Foster, Kshama Aswath, Stephen J Chanock, Heather F McKay, Ulrike Peters
BMC Genetics 2006, 7:56 (11December2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
The separate and combined effects of MHC genotype, parasite clone, and host gender on the course of malaria in mice
Claus Wedekind, Mirjam Walker, Tom J Little
BMC Genetics 2006, 7:55 (21November2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Software
Volume measures for linkage disequilibrium
Yuguo Chen, Chia-Ho Lin, Chiara Sabatti
BMC Genetics 2006, 7:54 (17November2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Deletion of the V2 vasopressin receptor gene in two Chinese patients with nephrogenic diabetes insipidus
Yan Dong, Haihui Sheng, Xueru Chen, Jun Yin, Qing Su
BMC Genetics 2006, 7:53 (14November2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Maize haplotype with a helitron-amplified cytidine deaminase gene copy
Jian-Hong Xu, Joachim Messing
BMC Genetics 2006, 7:52 (9November2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Prion gene haplotypes of U.S. cattle
Michael L Clawson, Michael P Heaton, John W Keele, Timothy PL Smith, Gregory P Harhay, William W Laegreid
BMC Genetics 2006, 7:51 (8November2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Computation of haplotypes on SNPs subsets: advantage of the "global method"
Cdric Coulonges, Olivier Delaneau, Manon Girard, Herv Do, Ronald Adkins, Jean-Louis Spadoni, Jean-Franois Zagury
BMC Genetics 2006, 7:50 (26October2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Assessment of genomic imprinting of SLC38A4, NNAT, NAP1L5, and H19 in cattle
Ismail Zaitoun, Hasan Khatib
BMC Genetics 2006, 7:49 (25October2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Methodology article
Genotyping faecal samples of Bengal tiger Panthera tigris tigris for population estimation: A pilot study
Jyotsna Bhagavatula, Lalji Singh
BMC Genetics 2006, 7:48 (17October2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Functional dissection of the Drosophila Kallmann's syndrome protein DmKal-1
Davide Andrenacci, Maria R Grimaldi, Vittorio Panetta, Elena Riano, Elena I Rugarli, Franco Graziani
BMC Genetics 2006, 7:47 (11October2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
A missense mutation in PMEL17 is associated with the Silver coat color in the horse
Emma Brunberg, Leif Andersson, Gus Cothran, Kaj Sandberg, Sofia Mikko, Gabriella Lindgren
BMC Genetics 2006, 7:46 (9October2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Dog Y chromosomal DNA sequence: identification, sequencing and SNP discovery
Christian Natanaelsson, Mattias CR Oskarsson, Helen Angleby, Joakim Lundeberg, Ewen Kirkness, Peter Savolainen
BMC Genetics 2006, 7:45 (6October2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Loss of imprinting at the Dlk1-Gtl2 locus caused by insertional mutagenesis in the Gtl2 5' region
Ekaterina Y Steshina, Michael S Carr, Elena A Glick, Aleksey Yevtodiyenko, Oliver K Appelbe, Jennifer V Schmidt
BMC Genetics 2006, 7:44 (3October2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Methodology article
Multinomial logistic regression approach to haplotype association analysis in population-based case-control studies
Yi-Hau Chen, Jau-Tsuen Kao
BMC Genetics 2006, 7:43 (15August2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Genetic affinities among the lower castes and tribal groups of India: inference from Y chromosome and mitochondrial DNA
Ismail Thanseem, Kumarasamy Thangaraj, Gyaneshwer Chaubey, Vijay Kumar Singh, Lakkakula VKS Bhaskar, B Mohan Reddy, Alla G Reddy, Lalji Singh
BMC Genetics 2006, 7:42 (7August2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central] [2 comments]

Research article
Abnormal X : autosome ratio, but normal X chromosome inactivation in human triploid cultures
Stanley M Gartler, Kartik R Varadarajan, Ping Luo, Thomas H Norwood, Theresa K Canfield, R Scott Hansen
BMC Genetics 2006, 7:41 (3July2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Software
SUP: an extension to SLINK to allow a larger number of marker loci to be simulated in pedigrees conditional on trait values
Mathieu Lemire
BMC Genetics 2006, 7:40 (3July2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [F1000 Biology]

Research article
Optimal two-stage strategy for detecting interacting genes in complex diseases
luliana lonita, Michael Man
BMC Genetics 2006, 7:39 (15June2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
A graphical assessment of p-values from sliding window haplotype tests of association to identify asthma susceptibility loci on chromosome 11q
Rasika A Mathias, Peisong Gao, Janet L Goldstein, Alexander F Wilson, Elizabeth W Pugh, Paulette Furbert-Harris, Georgia M Dunston, Floyd J Malveaux, Alkis Togias, Kathleen C Barnes, Terri H Beaty, Shau-Ku Huang
BMC Genetics 2006, 7:38 (14June2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Linkage analysis of longitudinal data and design consideration
Heping Zhang, Xiaoyun Zhong
BMC Genetics 2006, 7:37 (12June2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Methodology article
Visualization of C. elegans transgenic arrays by GFP
Aidyl S Gonzalez-Serricchio, Paul W Sternberg
BMC Genetics 2006, 7:36 (7June2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Growth hormone-releasing hormone (GHRH) polymorphisms associated with carcass traits of meat in Korean cattle
Hyun Sub Cheong, Du-Hak Yoon, Lyoung Hyo Kim, Byung Lae Park, Yoo Hyun Choi, Eui Ryong Chung, Yong Min Cho, Eng Woo Park, Il-Cheong Cheong, Sung-Jong Oh, Sung-Gon Yi, Taesung Park, Hyoung Doo Shin
BMC Genetics 2006, 7:35 (3June2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Association study of the trinucleotide repeat polymorphism within SMARCA2 and schizophrenia
Sarojini Sengupta, Lan Xiong, Ferid Fathalli, Chawki Benkelfat, Karim Tabbane, Zoltan Danics, Alain Labelle, Samarthji Lal, Marie-Odile Krebs, Guy Rouleau, Ridha Joober
BMC Genetics 2006, 7:34 (3June2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
A mosaic genetic screen for novel mutations affecting Drosophila neuroblast divisions
Cathy Slack, W Gregory Somers, Rita Sousa-Nunes, William Chia, Paul M Overton
BMC Genetics 2006, 7:33 (2June2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Methodology article
A minimally invasive method of piscine tissue collection and an analysis of long-term field-storage conditions for samples
James J Campanella, John V Smalley
BMC Genetics 2006, 7:32 (30May2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Genotyping of -Lactoglobulin gene by PCR-RFLP in Sahiwal and Tharparkar cattle breeds
Satyanarayana Rachagani, Ishwar Dayal Gupta, Neelam Gupta, SC Gupta
BMC Genetics 2006, 7:31 (25May2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Methodology article
Phenotype-genotype association grid: a convenient method for summarizing multiple association analyses
Daniel Levy, Steven R DePalma, Emelia J Benjamin, Christopher J O'Donnell, Helen Parise, Joel N Hirschhorn, Ramachandran S Vasan, Seigo Izumo, Martin G Larson
BMC Genetics 2006, 7:30 (22May2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Linkage disequilibrium blocks, haplotype structure, and htSNPs of human CYP7A1 gene
Kaori Nakamoto, Shuang Wang, Robert D Jenison, Grace L Guo, Curtis D Klaassen, Yu-Jui Yvonne Wan, Xiao-bo Zhong
BMC Genetics 2006, 7:29 (18May2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Genetic structure of Indian populations based on fifteen autosomal microsatellite loci
VK Kashyap, Saurav Guha, T Sitalaximi, G Hima Bindu, Seyed E Hasnain, R Trivedi
BMC Genetics 2006, 7:28 (17May2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Software
CapsID: a web-based tool for developing parsimonious sets of CAPS molecular markers for genotyping
Jonathan Taylor, Nicholas J Provart
BMC Genetics 2006, 7:27 (10May2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Search for QTL affecting the shape of the egg laying curve of the Japanese quail
Francis Minvielle, Boniface B Kayang, Miho Inoue-Murayama, Mitsuru Miwa, Alain Vignal, David Gourichon, Andr Neau, Jean-Louis Monvoisin, Shin' ichi Ito
BMC Genetics 2006, 7:26 (5May2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Genome-wide linkage analysis of inguinal hernia in pigs using affected sib pairs
Eli Grindflek, Maren Moe, Helge Taubert, Henner Simianer, Sigbjrn Lien, Thomas Moen
BMC Genetics 2006, 7:25 (3May2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Software
LRTae: improving statistical power for genetic association with case/control data when phenotype and/or genotype misclassification errors are present
Sandra Barral, Chad Haynes, Millicent Stone, Derek Gordon
BMC Genetics 2006, 7:24 (27April2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Commentary
The challenge for genetic epidemiologists: how to analyze large numbers of SNPs in relation to complex diseases
A Geert Heidema, Jolanda MA Boer, Nico Nagelkerke, Edwin CM Mariman, Daphne L van der A, Edith JM Feskens
BMC Genetics 2006, 7:23 (21April2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Discovery, linkage disequilibrium and association analyses of polymorphisms of the immune complement inhibitor, decay-accelerating factor gene (DAF/CD55) in type 1 diabetes
Hidenori Taniguchi, Christopher E Lowe, Jason D Cooper, Deborah J Smyth, Rebecca Bailey, Sarah Nutland, Barry C Healy, Alex C Lam, Oliver Burren, Neil M Walker, Luc J Smink, Linda S Wicker, John A Todd
BMC Genetics 2006, 7:22 (20April2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Allele frequency misspecification: effect on power and Type I error of model-dependent linkage analysis of quantitative traits under random ascertainment
Diptasri M Mandal, Alexa JM Sorant, Larry D Atwood, Alexander F Wilson, Joan E Bailey-Wilson
BMC Genetics 2006, 7:21 (20April2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Methodology article
Selection of SNP subsets for association studies in candidate genes: comparison of the power of different strategies to detect single disease susceptibility locus effects
Emmanuelle Cousin, Jean-Francois Deleuze, Emmanuelle Genin
BMC Genetics 2006, 7:20 (5April2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
A set of highly informative rat simple sequence length polymorphism (SSLP) markers and genetically defined rat strains
Tomoji Mashimo, Birger Voigt, Toshiko Tsurumi, Kuniko Naoi, Satoshi Nakanishi, Ken-ichi Yamasaki, Takashi Kuramoto, Tadao Serikawa
BMC Genetics 2006, 7:19 (4April2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Spontaneous rescue from cystic fibrosis in a mouse model
Nikoletta Charizopoulou, Martina Wilke, Martina Dorsch, Alice Bot, Huub Jorna, Silke Jansen, Frauke Stanke, Hans J Hedrich, Hugo R de Jonge, Burkhard Tmmler
BMC Genetics 2006, 7:18 (29March2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Refined localization of the FAT1 quantitative trait locus on pig chromosome 4 by marker-assisted backcrossing
Frida Berg, Susanne Stern, Kjell Andersson, Leif Andersson, Maria Moller
BMC Genetics 2006, 7:17 (17March2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Software
Fast "coalescent" simulation
Paul Marjoram, Jeff D Wall
BMC Genetics 2006, 7:16 (15March2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
QTL for microstructural and biophysical muscle properties and body composition in pigs
Klaus Wimmers, Ilse Fiedler, Torsten Hardge, Eduard Murani, Karl Schellander, Siriluck Ponsuksili
BMC Genetics 2006, 7:15 (9March2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Search for genetic variants in the p66Shc longevity gene by PCR-single strand conformational polymorphism in patients with early-onset cardiovascular disease
Federica Sentinelli, Stefano Romeo, Fabrizio Barbetti, Andrea Berni, Emanuela Filippi, Marzia Fanelli, Mara Fallarino, Marco G Baroni
BMC Genetics 2006, 7:14 (6March2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Characterization of the canine CLCN3 gene and evaluation as candidate for late-onset NCL
Anne Wohlke, Ottmar Distl, Cord Drogemuller
BMC Genetics 2006, 7:13 (3March2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Polymorphism discovery and association analyses of the interferon genes in type 1 diabetes
Gerard AJ Morris, Christopher E Lowe, Jason D Cooper, Felicity Payne, Adrian Vella, Lisa Godfrey, John S Hulme, Neil M Walker, Barry C Healy, Alex C Lam, Paul A Lyons, John A Todd
BMC Genetics 2006, 7:12 (22February2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Methodology article
Development and application of three-tiered nuclear genetic markers for basal Hexapods using single-stranded conformation polymorphism coupled with targeted DNA sequencing
Ryan C Garrick, Paul Sunnucks
BMC Genetics 2006, 7:11 (22February2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central] [1 comment]

Research article
Genetic relationship and diversity in a sesame (Sesamum indicum L.) germplasm collection using amplified fragment length polymorphism (AFLP)
Hernn E Laurentin, Petr Karlovsky
BMC Genetics 2006, 7:10 (16February2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Models and partition of variance for quantitative trait loci with epistasis and linkage disequilibrium
Tao Wang, Zhao-Bang Zeng
BMC Genetics 2006, 7:9 (10February2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Methodology article
Analysis of case-parent trios at a locus with a deletion allele: association of GSTM1 with autism
Steven Buyske, Tanishia A Williams, Audrey E Mars, Edward S Stenroos, Sue X Ming, Rong Wang, Madhura Sreenath, Marivic F Factura, Chitra Reddy, George H Lambert, William G Johnson
BMC Genetics 2006, 7:8 (10February2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Sex and age specific effects of chromosomal regions linked to body mass index in the Framingham Study
Larry D Atwood, Nancy L Heard-Costa, Caroline S Fox, Cashell E Jaquish, L Adrienne Cupples
BMC Genetics 2006, 7:7 (26January2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Analysis of molecular diversity, population structure and linkage disequilibrium in a worldwide survey of cultivated barley germplasm (Hordeum vulgare L.)
Lyudmyla V Malysheva-Otto, Martin W Ganal, Marion S Rder
BMC Genetics 2006, 7:6 (24January2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Methodology article
A quantitative linkage score for an association study following a linkage analysis
Tao Wang, Robert C Elston
BMC Genetics 2006, 7:5 (20January2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Segregation analysis of apolipoprotein A1 levels in families of adolescents: A community-based study in Taiwan
Kuo-Liong Chien, Wei J Chen, Hsiu-Ching Hsu, Ta-Chen Su, Ming-Fong Chen, Yuan-Teh Lee
BMC Genetics 2006, 7:4 (20January2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Does tumorigenesis select for or against mutations of the DNA repair-associated genes BRCA2 and MRE11?: Considerations from somatic mutations in microsatellite unstable (MSI) gastrointestinal cancers
Michiel S van der Heijden, Jonathan R Brody, Elhaam Elghalbzouri-Maghrani, Malgorzata Z Zdzienicka, Scott E Kern
BMC Genetics 2006, 7:3 (17January2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Mapping of panda plumage color locus on the microsatellite linkage map of the Japanese quail
Mitsuru Miwa, Miho Inoue-Murayama, Naoki Kobayashi, Boniface Baboreka Kayang, Makoto Mizutani, Hideaki Takahashi, Shin'ichi Ito
BMC Genetics 2006, 7:2 (12January2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Methodology article
Real-time PCR quantification of human complement C4A and C4B genes
Agnes Szilagyi, Bernadett Blasko, Denes Szilassy, George Fust, Maria Sasvari-Szekely, Zsolt Ronai
BMC Genetics 2006, 7:1 (10January2006)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

 

 

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