Table 2

Significant results (q-value < 0.05) for genome-wide association analysis for recombination rates using SNPs.

Chr
Position (cM) (Marker)
Unadjusted p-value
q-value

1q
129.761 tsc0831812
3.99 × 10-5
0.032874

173.005 tsc1229896
3.64 × 10-6
0.005141

176.25a tsc1687896
3.74 × 10-5
0.032874
2q
136.452a tsc0333128
1.01 × 10-5
0.012482

167.814 tsc0045403
2.00 × 10-8
0.000198

167.817 tsc1108827
1.21 × 10-6
0.001994
3q
70.968 tsc0753329
4.95 × 10-5
0.037662
4q
94.916 tsc0056600
8.00 × 10-8
0.000264
8q
103.504 tsc1305199
6.00 × 10-8
0.000264
10q
45.654 tsc0615240
2.60 × 10-7
0.000514

74.381 tsc0046577
1.45 × 10-5
0.015691
13q
50.514 tsc0616973
2.40 × 10-7
0.000514
14q
85.42a tsc1112831
1.59 × 10-5
0.015691

No significant results are found with microsatellites using the pFDR 0.05 cutoff

aindicates that the marker identified was from the markers that had the same map position

Huang et al. BMC Genetics 2005 6(Suppl 1):S51   doi:10.1186/1471-2156-6-S1-S51