Table 6 |
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|
PCR Primers used for the MLPH cDNA amplification and/or genomic MLPH mutation analysis |
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|
primer name |
primer sequence |
product size |
TM |
comments |
|
|
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|
MLPH cDNA, first round amplification |
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|
Mlph_cDNA_Ex1_F1 |
CCT TCC TTC CCC TGT AGG AC |
513 bp |
52°C |
|
|
Mlph_cDNA_Ex4_R |
GGA TCA CCT TGG CAC TCC |
|||
|
Mlph_cDNA_Ex4_F1 |
GTG AAG ATC GGC TCG GTA G |
686 bp |
52°C |
|
|
Mlph_cDNA_Ex9_R |
GGA TGC TGA GAG GTG GTG |
|||
|
Mlph_cDNA_Ex7_F1 |
CTT GGA CTT TGA GGC AGA C |
985 bp |
52°C |
|
|
Mlph_cDNA_Ex14_R |
ACT GAA CTT CCT TCT GAG G |
|||
|
Mlph_cDNA_Ex10_F |
AGA GAA GAG GAG ACC CTC |
651 bp |
52°C |
|
|
Mlph_cDNA_Ex16_R |
GCT GGG TCA TCA CAG GC |
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|
MLPH cDNA, second round amplification |
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|
Mlph_cDNA_Ex1_F2 |
CTG TAG GAC CGG AGA GAG C |
502 bp |
52°C |
|
|
Mlph_cDNA_Ex4_R |
GGA TCA CCT TGG CAC TCC |
|||
|
Mlph_cDNA_Ex4_F2 |
AGA TCG GCT CGG TAG AGT G |
679 bp |
52°C |
|
|
Mlph_cDNA_Ex9_R |
GGA TGC TGA GAG GTG GTG |
|||
|
Mlph_cDNA_Ex7_F2 |
CTC TGA CGA CTC CAC TTG |
967 bp |
52°C |
|
|
Mlph_cDNA_Ex14_R |
ACT GAA CTT CCT TCT GAG G |
|||
|
Mlph_cDNA_Ex10_F |
AGA GAA GAG GAG ACC CTC |
651 bp |
52°C |
same primers as in first round amplification |
|
Mlph_cDNA_Ex16_R |
GCT GGG TCA TCA CAG GC |
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|
MLPH genomic DNA |
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|
P_Mlph_Ex1_for1 |
AGT GGC CTC AAG CCC TG |
591 bp |
56°C |
|
|
P_Mlph_Ex1_rev |
ATG AGC TCC CTG AGA ACC |
|||
|
P_Mlph_Ex1_for2 |
CTC CTC CCG AGG CTC CTG |
563 bp |
56°C |
|
|
P_Mlph_Ex1_rev |
ATG AGC TCC CTG AGA ACC |
|||
|
Mlph_Ex2_for |
GTC ACC GAC ATT ATG TCA CAG |
598 bp |
58°C |
|
|
Mlph_Ex2_rev |
CAG GCT GGA AGG TCA GAT C |
|||
|
Mlph_Ex3&4_for |
GAG ACC CAG GAT CGA GTC |
725 bp |
56°C |
|
|
Mlph_Ex3&4_rev |
CAC TCA CAT TCC AAA GGA TC |
|||
|
Mlph_Ex5_for |
AGA AGT GAT GGA GGT CAC TG |
471 bp |
56°C |
|
|
Mlph_Ex5_rev |
ACC GAA CAG GAA CAG GAG |
|||
|
Mlph_Ex6_for |
AG CTT GCC TGG ATG GAT G |
582 bp |
53°C |
|
|
Mlph_Ex6_rev |
CTG CAG CCT CTG CCA AC |
|||
|
Mlph_Ex7_for |
GTC CTC AGC ACT TCT GAG |
568 bp |
53°C |
|
|
Mlph_Ex7_rev |
GTG AGA AGC TTC TGG ACC |
|||
|
Mlph_Ex8_for |
CAG CGG GAT TTC TGA AAG C |
483 bp |
56°C |
|
|
Mlph_Ex8_rev |
GTG TTG GAC AGT CAG AGT G |
|||
|
Mlph_Ex9_for |
CCC GCC TTT GCC TTA AGC |
416 bp |
56°C |
|
|
Mlph_Ex9_rev |
GCT GCA AGG AGG AGC TTC |
|||
|
Mlph_Ex10_for |
CAG AGC CTG GCT CCT GAG |
600 bp |
56°C |
|
|
Mlph_Ex10_rev |
CAC CTG GGA CAG GGA AGC |
|||
|
Mlph_Ex11_for |
AGG CGT CCA GAG GTT GTG |
550 bp |
55°C |
|
|
Mlph_Ex11_rev |
GCC TGC TTC TGG AGA AGC |
|||
|
Mlph_Ex12_for |
CGC CGA CCA AGT CTT TGC |
623 bp |
55°C |
|
|
Mlph_Ex12_rev |
TGG ACT TGA GGC CGT GTG |
|||
|
Mlph_Ex13_for |
CCT GTC TCC CCA GAT TCG |
539 bp |
55°C |
|
|
Mlph_Ex13_rev |
GGG TTT GCC AAG GCT GAG |
|||
|
Mlph_Ex14_for |
CTC CTT TAT GCT CTG GCA C |
591 bp |
55°C |
|
|
Mlph_Ex14_rev |
TTG TCA CAC GGA GAC ACA G |
|||
|
Mlph_Ex15_for |
CTC AGG CAG GCA GAC AAG |
461 bp |
55°C |
|
|
Mlph_Ex15_rev |
TGC TCT GGG GTC CTA ACG |
|||
|
P_MLph_Ex16_for |
GCT TCA GAG CCT GAA ATT CT |
469 bp |
53°C |
|
|
P_Mlph_Ex16_rev |
GAC AAA AGA TCA GGC TGG AG |
|||
|
|
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|
Philipp et al. BMC Genetics 2005 6:34 doi:10.1186/1471-2156-6-34 |
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