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Editor-in-Chief
Melissa Norton, MD

Biology Editor
Penelope Webb, PhD

In-house Editor
Hans Zauner




BMC Genetics, Volume 6

 
Volume 6 Suppl 1
Proceedings
Noordwijkerhout, The Netherlands. 7-10 September 2004

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Research article
The variable number of tandem repeats element in DAT1 regulates in vitro dopamine transporter density
Sidney H VanNess, Michael J Owens, Clinton D Kilts
BMC Genetics 2005, 6:55 (27November2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Targeted oligonucleotide-mediated microsatellite identification (TOMMI) from large-insert library clones
Kefei Chen, Christoph Knorr, Kirsten Bornemann-Kolatzki, Jun Ren, Lusheng Huang, Gary A Rohrer, Bertram Brenig
BMC Genetics 2005, 6:54 (15November2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
RB1 gene mutation up-date, a meta-analysis based on 932 reported mutations available in a searchable database
Jos R Valverde, Javier Alonso, Itziar Palacios, ngel Pestaa
BMC Genetics 2005, 6:53 (4November2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Analysis of four DLX homeobox genes in autistic probands
Steven P Hamilton, Jonathan M Woo, Elaine J Carlson, Nel Ghanem, Marc Ekker, John LR Rubenstein
BMC Genetics 2005, 6:52 (2November2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Assessing the power of tag SNPs in the mapping of quantitative trait loci (QTL) with extremal and random samples
Kui Zhang, Fengzhu Sun
BMC Genetics 2005, 6:51 (19October2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Characterization of a likelihood based method and effects of markers informativeness in evaluation of admixture and population group assignment
Bao-Zhu Yang, Hongyu Zhao, Henry R Kranzler, Joel Gelernter
BMC Genetics 2005, 6:50 (14October2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Two previously proposed P1/P2-differentiating and nine novel polymorphisms at the A4GALT (Pk) locus do not correlate with the presence of the P1 blood group antigen
sa Hellberg, M Alan Chester, Martin L Olsson
BMC Genetics 2005, 6:49 (7October2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Epigenetic predisposition to expression of TIMP1 from the human inactive X chromosome
Catherine L Anderson, Carolyn J Brown
BMC Genetics 2005, 6:48 (29September2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Reconstructing recent human phylogenies with forensic STR loci: A statistical approach
Suraksha Agrawal, Faisal Khan
BMC Genetics 2005, 6:47 (28September2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
MAOA haplotypes associated with thrombocyte-MAO activity
Mrten Jansson, Shane McCarthy, Patrick F Sullivan, Paul Dickman, Bjrn Andersson, Lars Oreland, Martin Schalling, Nancy L Pedersen
BMC Genetics 2005, 6:46 (20September2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Software
G2D: a tool for mining genes associated with disease
Carolina Perez-Iratxeta, Matthias Wjst, Peer Bork, Miguel A Andrade
BMC Genetics 2005, 6:45 (22August2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Tests for the replication of an association between Egfr and natural variation in Drosophila melanogaster wing morphology
Arnar Palsson, James Dodgson, Ian Dworkin, Greg Gibson
BMC Genetics 2005, 6:44 (15August2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
A screen for proteins that interact with PAX6: C-terminal mutations disrupt interaction with HOMER3, DNCL1 and TRIM11
Simon T Cooper, Isabel M Hanson
BMC Genetics 2005, 6:43 (12August2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [F1000 Biology] [Cited on BioMed Central]

Methodology article
Development of novel heminested PCR assays based on mitochondrial 16s rRNA gene for identification of seven pecora species
Saurav Guha, VK Kashyap
BMC Genetics 2005, 6:42 (11August2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Correction
Most of the extant mtDNA boundaries in South and Southwest Asia were likely shaped during the initial settlement of Eurasia by anatomically modern humans
Mait Metspalu, Toomas Kivisild, Ene Metspalu, Jri Parik, Georgi Hudjashov, Katrin Kaldma, Piia Serk, Monika Karmin, Doron M Behar, M Thomas P Gilbert, Phillip Endicott, Sarabjit Mastana, Surinder S Papiha, Karl Skorecki, Antonio Torroni, Richard Villems
BMC Genetics 2005, 6:41 (4August2005)
[Abstract] [Full text] [PDF]

Research article
The missense mutation in Abcg5 gene in spontaneously hypertensive rats (SHR) segregates with phytosterolemia but not hypertension
Jianliang Chen, Ashok Batta, Shuqin Zheng, Wayne R Fitzgibbon, Michael E Ullian, Hongwei Yu, Patrick Tso, Gerald Salen, Shailendra B Patel
BMC Genetics 2005, 6:40 (18July2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
The polymorphic nature of the human dopamine D4 receptor gene: A comparative analysis of known variants and a novel 27 bp deletion in the promoter region
E Szantai, R Szmola, M Sasvari-Szekely, A Guttman, Z Ronai
BMC Genetics 2005, 6:39 (28June2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Genetic structure in four West African population groups
Adebowale A Adeyemo, Guanjie Chen, Yuanxiu Chen, Charles Rotimi
BMC Genetics 2005, 6:38 (24June2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
MtDNA diversity among four Portuguese autochthonous dog breeds: a fine-scale characterisation
Barbara van Asch, Lusa Pereira, Filipe Pereira, Pedro Santa-Rita, Manuela Lima, Antnio Amorim
BMC Genetics 2005, 6:37 (22June2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Inbred mouse strains C57BL/6J and DBA/2J vary in sensitivity to a subset of bitter stimuli
John D Boughter Jr, Sandeep Raghow, Theodore M Nelson, Steven D Munger
BMC Genetics 2005, 6:36 (20June2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Tree measures and the number of segregating sites in time-structured population samples
Roald Forsberg, Alexei J Drummond, Jotun Hein
BMC Genetics 2005, 6:35 (16June2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Polymorphisms within the canine MLPH gene are associated with dilute coat color in dogs
Ute Philipp, Henning Hamann, Lars Mecklenburg, Seiji Nishino, Emmanuel Mignot, Anne-Rose Gnzel-Apel, Sheila M Schmutz, Tosso Leeb
BMC Genetics 2005, 6:34 (16June2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Identification and mapping of yield and yield related QTLs from an Indian accession of Oryza rufipogon
Pradeep Reddy Marri, Sarla N, Laxminarayana V Reddy, EA Siddiq
BMC Genetics 2005, 6:33 (13June2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Haplotypes at the Tas2r locus on distal chromosome 6 vary with quinine taste sensitivity in inbred mice
Theodore M Nelson, Steven D Munger, John D Boughter Jr
BMC Genetics 2005, 6:32 (6June2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Genome-wide screening for genes whose deletions confer sensitivity to mutagenic purine base analogs in yeast
Elena I Stepchenkova, Stanislav G Kozmin, Vladimir V Alenin, Youri I Pavlov
BMC Genetics 2005, 6:31 (2June2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Inferring haplotypes at the NAT2 locus: the computational approach
Audrey Sabbagh, Pierre Darlu
BMC Genetics 2005, 6:30 (2June2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Potential genetic modifiers of the cystic fibrosis intestinal inflammatory phenotype on mouse chromosomes 1, 9, and 10
Oxana Norkina, Robert C De Lisle
BMC Genetics 2005, 6:29 (27May2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Methodology article
Use of SNPs to determine the breakpoints of complex deficiencies, facilitating gene mapping in Caenorhabditis elegans
Pavan Kadandale, Brian Geldziler, Melissa Hoffmann, Andrew Singson
BMC Genetics 2005, 6:28 (26May2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
PAX6 mutations: genotype-phenotype correlations
Ioanna Tzoulaki, Ian MS White, Isabel M Hanson
BMC Genetics 2005, 6:27 (26May2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Conserved genomic organisation of Group B Sox genes in insects.
Carol McKimmie, Gertrud Woerfel, Steven Russell
BMC Genetics 2005, 6:26 (19May2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Estimating haplotype frequencies in pooled DNA samples when there is genotyping error
Shannon RE Quade, Robert C Elston, Katrina AB Goddard
BMC Genetics 2005, 6:25 (19May2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Methodology article
On the use of haplotype phylogeny to detect disease susceptibility loci
Claire Bardel, Vincent Danjean, Jean-Pierre Hugot, Pierre Darlu, Emmanuelle Gnin
BMC Genetics 2005, 6:24 (18May2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Naturally occurring antisense RNA of histone H2a in mouse cultured cell lines
Hiromi Nishida, Yasuhiro Tomaru, Yuko Oho, Yoshihide Hayashizaki
BMC Genetics 2005, 6:23 (14May2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Common polymorphism in H19 associated with birthweight and cord blood IGF-II levels in humans
Clive J Petry, Ken K Ong, Bryan J Barratt, Diane Wingate, Heather J Cordell, Susan M Ring, Marcus E Pembrey, The ALSPAC Study Team, Wolf Reik, John A Todd, David B Dunger
BMC Genetics 2005, 6:22 (10May2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Characterisation of the genomic architecture of human chromosome 17q and evaluation of different methods for haplotype block definition
Eleftheria Zeggini, Anne Barton, Stephen Eyre, Daniel Ward, William Ollier, Jane Worthington, Sally John
BMC Genetics 2005, 6:21 (25April2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Differential selection and mutation between dsDNA and ssDNA phages shape the evolution of their genomic AT percentage
Xuhua Xia, Kwok Yung Yuen
BMC Genetics 2005, 6:20 (11April2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Analysis of sequence variability in the CART gene in relation to obesity in a Caucasian population
Audrey Gurardel, Mouna Barat-Houari, Francis Vasseur, Christian Dina, Vincent Vatin, Karine Clment, Delphine Eberl, Valrie Vasseur-Delannoy, Christopher G Bell, Pilar Galan, Serge Hercberg, Nicole Helbecque, Natascha Potoczna, Fritz F Horber, Philippe Boutin, Philippe Froguel
BMC Genetics 2005, 6:19 (11April2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Methodology article
Power and sample size calculations in the presence of phenotype errors for case/control genetic association studies
Brian J Edwards, Chad Haynes, Mark A Levenstien, Stephen J Finch, Derek Gordon
BMC Genetics 2005, 6:18 (8April2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
ISSR markers show differentiation among Italian populations of Asparagus acutifolius L
Maria Sica, Graziella Gamba, Stefania Montieri, Luciano Gaudio, Serena Aceto
BMC Genetics 2005, 6:17 (18March2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Methodology article
X- and Y-chromosome specific variants of the amelogenin gene allow sex determination in sheep (Ovis aries) and European red deer (Cervus elaphus)
I Pfeiffer, B Brenig
BMC Genetics 2005, 6:16 (16March2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Methodology article
Rim 2/Hipa CACTA transposon display ; A new genetic marker technique in Oryza species
Soon-Jae Kwon, Kyong-Chul Park, Jin-Hong Kim, Ju Kyong Lee, Nam-Soo Kim
BMC Genetics 2005, 6:15 (14March2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Two new plumage mutations in the Japanese quail: "curly" feather and "rusty" plumage
Francis Minvielle, David Gourichon, Chantal Moussu
BMC Genetics 2005, 6:14 (11March2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Software
Isolation by distance, web service
Jeffrey L Jensen, Andrew J Bohonak, Scott T Kelley
BMC Genetics 2005, 6:13 (11March2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Methodology article
Searching QTL by gene expression: analysis of diabesity
Aaron C Brown, William I Olver, Charles J Donnelly, Marjorie E May, Jrgen K Naggert, Daniel J Shaffer, Derry C Roopenian
BMC Genetics 2005, 6:12 (10March2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Research article
Genetic linkage analysis supports the presence of two susceptibility loci for alcoholism and heavy drinking on chromosome 1p22.1-11.2 and 1q21.3-24.2
Irene Guerrini, Christopher CH Cook, Wendy Kest, Audrey Devitgh, Andrew McQuillin, David Curtis, Hugh MD Gurling
BMC Genetics 2005, 6:11 (1March2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
A novel replication-independent histone H2a gene in mouse
Hiromi Nishida, Takahiro Suzuki, Yasuhiro Tomaru, Yoshihide Hayashizaki
BMC Genetics 2005, 6:10 (19February2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Construction and analysis of tag single nucleotide polymorphism maps for six human-mouse orthologous candidate genes in type 1 diabetes
Lisa M Maier, Deborah J Smyth, Adrian Vella, Felicity Payne, Jason D Cooper, Rebecca Pask, Christopher Lowe, John Hulme, Luc J Smink, Heather Fraser, Carolyn Moule, Kara M Hunter, Giselle Chamberlain, Neil Walker, Sarah Nutland, Dag E Undlien, Kjersti S Rnningen, Cristian Guja, Constantin Ionescu-Trgovite, David A Savage, David P Strachan, Laurence B Peterson, John A Todd, Linda S Wicker, Rebecca C Twells
BMC Genetics 2005, 6:9 (18February2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
An interactional network of genes involved in chitin synthesis in Saccharomyces cerevisiae
Guillaume Lesage, Jesse Shapiro, Charles A Specht, Anne-Marie Sdicu, Patrice Mnard, Shamiza Hussein, Amy Hin Yan Tong, Charles Boone, Howard Bussey
BMC Genetics 2005, 6:8 (16February2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [F1000 Biology] [Cited on BioMed Central]

Software
Comparative linkage analysis and visualization of high-density oligonucleotide SNP array data
Igor Leykin, Ke Hao, Junsheng Cheng, Nicole Meyer, Martin R Pollak, Richard JH Smith, Wing Hung Wong, Carsten Rosenow, Cheng Li
BMC Genetics 2005, 6:7 (15February2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Genetic variation analysis of the Bali street dog using microsatellites
Dawn N Irion, Alison L Schaffer, Sherry Grant, Alan N Wilton, Niels C Pedersen
BMC Genetics 2005, 6:6 (8February2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Methodology article
An automated system for measuring parameters of nematode sinusoidal movement
Christopher J Cronin, Jane E Mendel, Saleem Mukhtar, Young-Mee Kim, Robert C Stirbl, Jehoshua Bruck, Paul W Sternberg
BMC Genetics 2005, 6:5 (7February2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Influence of language and ancestry on genetic structure of contiguous populations: A microsatellite based study on populations of Orissa
Sanghamitra Sahoo, VK Kashyap
BMC Genetics 2005, 6:4 (5February2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Transient expression analysis of allelic variants of a VNTR in the dopamine transporter gene (DAT1)
Jonathan Mill, Philip Asherson, Ian Craig, Ursula M D'Souza
BMC Genetics 2005, 6:3 (31January2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research article
Variants in the vitamin D receptor gene and asthma
Matthias Wjst
BMC Genetics 2005, 6:2 (15January2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central] [1 comment]

Research article
The Prader-Willi syndrome murine imprinting center is not involved in the spatio-temporal transcriptional regulation of the Necdin gene
Franoise Watrin, Elodie Le Meur, Nathalie Roeckel, Marie-Anne Ripoche, Luisa Dandolo, Franoise Muscatelli
BMC Genetics 2005, 6:1 (5January2005)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

 

 

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