Figure 1.

Allele substitution effects of SNPs on fertility and production traits. Only effects with P values and/or Q values < 0.05 are included. Numbers represent the magnitude of the allele substitution effect. Dark blue rectangles are linear effects in the same direction as DPR (Q < 0.05), light blue rectangles are linear effects in the same direction as DPR (P < 0.05 but Q value ≥ 0.05), red rectangles are linear effects in the opposite direction as DPR (P and Q value < 0.05), and pink rectangles are linear effects in the opposite direction as DPR (P < 0.05 but Q ≥ 0.05). Empty cells indicate that there was no significant effect of the SNP on the trait based on P or Q values. Abbreviations are as follows: CCR, cow conception rate; DPR, daughter pregnancy rate; FPC, fat percent; FY, fat yield; HCR, heifer conception rate; MY, milk yield; NM, net merit; PL, productive life; PPC, protein percent; PY, protein yield; SCS, somatic cell score.

Cochran et al. BMC Genetics 2013 14:49   doi:10.1186/1471-2156-14-49
Download authors' original image