Figure 3.

Single QTL scan LOD score plots for X-zone vacuolation grades. Results for (A) F2 non-Ay mice, (B) F2Ay mice, (C) combined F2 mice. The X-axis shows the chromosome numbers and the Y-axis shows the LOD scores at these locations. Blue lines indicate the LOD scores obtained when analyzing the grade as a parametric trait, red lines indicate the LOD scores obtained when analyzing the grade as a non-parametric trait, and green lines indicate the LOD scores obtained when analyzing the grade as a binary trait. Horizontal dashed lines (color-coded by each analytical method) indicate significant threshold LOD scores determined by 1,000 permutations.

Suto BMC Genetics 2012 13:95   doi:10.1186/1471-2156-13-95
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