Additional file 3.

Table showing SNP positions [in bracket] and flanking sequences (about 50 bases each side of the SNPs) in the 768-plex Illumina Goldengate assay, with the SNP Id, TSA (transcript shotgun assembly) contig Id of the sequence from variety 'Asha' (NCBI GenBank Ac. no. EZ647865-EZ683068) and SNP quality scores based on Illumina SNP assay design tool.

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Kumawat et al. BMC Genetics 2012 13:84   doi:10.1186/1471-2156-13-84