Table 3

Linear mixed model analysis of faeces rumen experiment
Source of variation DPI_rumen JGI_rumen
Sample Type 28.68% *** 31.56% ***
Host Animal 0.85% *** 0.65% ***
Contig 20.65% 25.70%
Error 49.81% 42.09%

A linear mixed model (Yijk = μ + sample typei + contigj + animalk + eijk) was fitted to the read using ASReml [21] count data, where Y = logn transformed counts, position = the position within the rumen that the sample was from, animal = the host animal that samples were taken from. *** p < 0.00001.

Ross et al.

Ross et al. BMC Genetics 2012 13:53   doi:10.1186/1471-2156-13-53

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