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CpGPAP: CpG island predictor analysis platform

Li-Yeh Chuang1, Cheng-Huei Yang2, Ming-Cheng Lin3 and Cheng-Hong Yang34*

Author Affiliations

1 Department of Chemical Engineering & Institute of Biotechnology and Chemical Engineering, I-Shou University, Kaohsiung, 8004, Taiwan

2 Department of Electronic Communication Engineering, National Kaohsiung Marine University, Kaohsiung, 81157, Taiwan

3 Department of Electronic Engineering, National Kaohsiung University of Applied Sciences, Kaohsiung, 80778, Taiwan

4 Department of Network Systems, Toko University, Chiayi, 61363, Taiwan

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BMC Genetics 2012, 13:13  doi:10.1186/1471-2156-13-13

Published: 2 March 2012

Additional files

Additional file 1:

Table S1. Comparison of different methods for CpG island prediction (CPSO). Table S2. Comparison of different methods for CpG island prediction (CpGGA). Table S3. Comparison of different methods on the number of CpG islands identified in the entire human genomes. Supplementary Methods. Algorithm CGA. Figure S1. The pseudo-code for the PSO. Figure S2. The pseudo-code for the GA. Figure S3. Flowchart for the complementary GA. Figure S4. Flowchart for the complementary PSO [3,13,28,29].

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