Table 3

Genetic locations of candidate gene-derived markers and QTLs on the p150/112 reference genetic map. Chr denotes chromosome
Candidate rice ortholocus Reference Prerennial ryegrass QTL LG Reference Anchor marker
Gene Physical location (Chr.: Mb) QTL Marker Physical location*a(Chr.: Mb)
EUI1 Chr. 5: 23.7 Mb [51] qPlantheight_C3_1 1 [13] PSR162 Chr. 5: 25.5 Mb
PDT Chr. 7: 30 Mb [52] qCP-Sep-03-f2 2 [46] CDO418 Chr. 7: 27.6 Mb
qCP-Sep-03-m2 2 [46] CDO59 Chr. 7: 26.4 Mb
qCP-04-m2 2 [46] RZ395 Chr. 7: 24.6 Mb
qCP-04-f2 2 [46] CDO405 Chr. 7: 27.6 Mb
qCP-su-gh-01_2 2 [14] CDO405 Chr. 7: 27.6 Mb
OsGA3ox2 Chr. 1: 4 Mb [53] qFG-04-f3.2 3 [45] CDO460 Chr. 1: 1.4 Mb
DGL1*b Chr. 1: 28.2 Mb [54] qLeafwidth_C3_3 3 [13] CDO345 Chr. 1: 37.9 Mb
GA20ox-2*b Chr. 1: 30 Mb [55] qPlantheight_C3_3 3 [13] CDO345 Chr. 1: 37.9 Mb
Ph1*b Chr. 1: 38.3 Mb [56] qTillersize_C3_3 3 [13] CDO345 Chr. 1: 37.9 Mb
qLET_WSCF2_3 3 [44] CDO345 Chr. 1: 37.9 Mb
qFG-03-m3 3 [45] CDO345 Chr. 1: 37.9 Mb
Pi37 Chr. 1: 33.1 Mb [57] qPMR1_INF1_VrnA 3 [40] LRGA4 Chr. 1:20.6 Mb
qCrownrust04_WI2_MFB3 3 [41] RZ444 Chr. 1:29.7 Mb
OsPIPK1 Chr. 3: 28.2 Mb [58] qHD_PxA_4 4 [29] CDO795 Chr. 3: 30.1 Mb
qHD_WSC_4 4 [15] CDO795 Chr. 3: 30.1 Mb
qHD_C3_4 4 [15] CDO795 Chr. 3: 30.1 Mb
Pib Chr. 2: 35.1 Mb [59] qGLSGG9gc_1_MFA_6 6 [34] CDO686 Chr. 2: 31.8 Mb
qGLSGG9gc_2_MFA_6 6 [34] CDO686 Chr. 2: 31.8 Mb
D3 Chr. 6: 2.8 Mb [60] qLL_p150/112_7 7 [15] Hd3a Chr. 6: 2.9 Mb
qLL_WSC_7 7 [15] Hd3a Chr. 6: 2.9 Mb

*a Location of candidate orthologue in rice.

*b Candidate genes for Leafwidth_C3_3, Plantheight_C3_3, Tillersize_C3_3, LET_WSCF2_3 and qFG-03-m3.

Shinozuka et al.

Shinozuka et al. BMC Genetics 2012 13:101   doi:10.1186/1471-2156-13-101

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