Table 2

Bovine genes and published QTLs in regions showing evidence of selection in Zel vs Lori Bakhtiari data set

Chr-Region

Location on

Ovine genome

Location on

Bovine genome

Gene*

RefSeq Number

QTL

QTL

Reference


2-1

2:55859169-56302905

8:62601056-63034390

NPR2

NM_174126.2

Fat Depth

[44]

SPAG8

NM_001102005.1

Carcass weight

[45]

HINT2

NM_174340.2

Body weight (birth)

[45]

TMEM8B

NM_001103335.1

2-2

2:73628609-73861345

8:45226663-45415081

---

Fat Depth

[44]

Fat thickness

[44]

Carcass weight

[45]

Body weight (birth and mature)

[45]

3

3:146615284-146676235

5:33981017-34041987

CACNB3

NM_174509.3

Meat

[46]

Tenderness

DDX23

NM_001102202.1

Hot Carcass Weight

[47]

Birth Weight

[48,49]

5

5:47146900-47332222

7:44936435-45113988

PPP2CA

NM_181031.2

Fat thickness

[48]

SKP1

NM_001034781.1

TCF7

NM_001099186.1

7-1

7:30510065-30587784

10:29363930-29441529

----

Milk fat yield

[50]

Carcass weight

[48]

Hot Carcass Weight

[48]

Body weight (birth)

[45]

7-2

7:46639859-46910155

10:45312778-45581699

PTGDR

NM_001098034.1

Milk fat yield

[50]

Hot Carcass Weight

[48]

Body depth

[51]

X

X:59192476-60151772

X:51751347-52712765

---


* Obtained by orthology with the Bovine genome

Moradi et al. BMC Genetics 2012 13:10   doi:10.1186/1471-2156-13-10

Open Data