Table 2

Genotypes of the founding parents.

Parents

Sequence

Genotype (bp)


P11 (Bleke)

GGCGAGGG

    TGAGTG
GGCGAGGG
    TGAGTG

763, 763


P31 (AquaGen)

    CGAGCG
AGAGGGTGGGCGAGAGGG

null, null


P14 (Bleke)

not sequenced

619, 634


P34 (AquaGen)

    CGAGCG
AGAGGG
    TGAGTG
GG

null, null


P15 (Bleke)

GGCGAGGG

    TGAGTG
GGCGAGGG
    TGAGTG

623, 623


P35 (AquaGen)

    CGAGCG
AGAGGG
    TGAGTG
GG

null, null


Genotypes of the founding parents (SALBANK) in the Bleke and Atlantic salmon commercial lines (AquaGen). Null genotypes represent non-amplifying alleles in the mapping population. The SCARB1-2 alleles, ranged in size from 623 to763 bp, and comprise the enhancer of zeste consensus motif (EZH2) [T/C]GAG[T/C][G/T] (underlined). The sequence of the repetitive EZH2-elements diverges for Bleke and the commercial Atlantic salmon.

Sundvold et al. BMC Genetics 2011 12:52   doi:10.1186/1471-2156-12-52

Open Data