Table 2

Direct assignment of the escapees to sample for different sets of loci.

SNPs

Sample

10 SNP

25 SNP

28 unlinked SNPs

195 mapped SNPs

300 SNPs

I

32

34

34

35

35

A-H

4

2

2

1

1

STRs

Sample

2 STR

4 STR

14 STR

I

42

42

47

A-H

6

6

1

STR and SNP combined

Sample

4STR + 10 SNP

4 STR + 25 SNP

14 STR + 300 SNP

I

46

47

49

A-H

3

2

0

SNP loci were selected by highest global F_ST whereas STRs were selected by number of alleles. 28 unlinked SNPs = highest global F_ST for each of the linkage groups. 195 mapped SNPs only includes SNPs > 1 cM distance from next SNP. Different total numbers of escapees in the different data sets is due to differences in numbers of individuals genotyped.

Glover et al. BMC Genetics 2010 11:2   doi:10.1186/1471-2156-11-2