Table 1

Species utilized in this study and the sources of DNA or sequence data

Species

Source

Sample Identifier

GenBank ID/Comments


Tamandua mexicana

(Anteater, Tamandua)

Leona Chemnick, Beckman Center for Conservations Research/CRES

KB12462

GenBank:FJ204923

Myrmecophaga tridactyla

(Anteater, Giant)

Leona Chemnick, Beckman Center for Conservations Research/CRES

OR831

GenBank:FJ204926

Dasypus novemcinctus

(Armadillo)

American Type Culture Collection

CRL-6009, Trachea cells

GenBank:FJ204896

Myotis austroriparius

(Bat)

David A. Ray, Dept of Biology, West Virginia University,

Maus M8133 or M8135

No sequence obtained

Felis catus

(Cat)

Novagen

69235

GenBank:FJ204897

GenBank:FJ204898

Pan troglodytes

(Chimpanzee)

Coriell Cell Repositories, Coriell Institute for Medical Research

NA03448

GenBank:FJ20489

GenBank:FJ204900

Bos taurus

(Cow)

Novagen

69231

GenBank:FJ204901

GenBank:FJ204902

Odocoileus virginianus

(Deer)

Highlands Land Association, Fort Hill, PA

7X57-139 gr

GenBank:FJ204903

Canis lupus familiaris

(Dog)

Novagen

69234

GenBank:FJ204904

Tursiops truncatus

(Dolphin, Bottlenose)

Southwest Fisheries Science Center, La Jolla, CA

Z 57948, MBB1

GenBank:FJ204927

Delphinus delphis

(Dolphin, Short-Beaked Common)

Southwest Fisheries Science Center, La Jolla, CA

Z 23148

GenBank:FJ204905

GenBank:FJ204906

Tachyglossus aceleatus

(Echidna)

Frank Grützner, School of Molecular & Biomed. Sci., Univ. Adelaide, Australia

No sequence obtained

Loxodonta africana

(Elephant, African)

Stergios-Orestis Kolokotronis, American Museum of Natural History, NY, NY

AR11-105098

GenBank:FJ204909

GenBank:FJ204910

Elephas maximus

(Elephant, Asian)

Stergios-Orestis Kolokotronis, American Museum of Natural History, NY, NY

AR9-105095

GenBank:FJ204907

GenBank:FJ204908

Gorilla gorilla

(Gorilla)

Coriell Cell Repositories, Coriell Institute for Medical Research

NG05251

GenBank:FJ204911

GenBank:FJ204912

Cavia porcellus

(Guinea Pig)

Pamela Gehron Robey, NIDCR, NIH, Bethesda, MD

bone marrow stromal cells, P8

GenBank:FJ204913

Erinacaeus concolor

(Hedgehog, Eastern)

Godfrey M. Hewitt, University of East Anglia, Norwich, UK

No sequence obtained

Erinacaeus europeus

(Hedgehog, European)

Godfrey M. Hewitt, University of East Anglia, Norwich, UK

No sequence obtained

Equus caballus

(Horse)

Roger Smith & Jayesh Dudhia, The Royal Veterinary College, London, UK

UCSC Genome Browser, Sep 2007, equCab2

Homo sapiens

(Human)

GenBank

NM_014208

Dipodomys ordii

(Kangaroo Rat)

UCSC Genome Browser

Jul 2008, dipOrd1

Lemur catta

(Lemur)

Coriell Cell Repositories, Coriell Institute for Medical Research

NA7099

GenBank:FJ204914

Mammuthus primigenius

(Mammoth)

Mammoth Genome Project, PSU

http://mammoth.psu.edu webcite

Trichechus manatus latirostris

(Manatee)

Robert K. Bonde, U.S. Geological Survey, Florida Integrated Sci. Center

CCR-007-009, 10, 11

GenBank:FJ204915

GenBank:FJ204916

Callithrix jacchus

(Marmoset)

UCSC Genome Browser

June 2007, calJac1

Mus musculus

(Mouse)

GenBank

NC_000071

Monodelphis domestica

(Opossum, Gray short-tailed)

UCSC Genome Browser

Jan 2006, monDom4

Didelphis marsupialis virginiana

(Opossum, Virginia)

American Type Culture Collection

CRL-1840,

cortex kidney cells

GenBank:FJ204917

Manis tricuspis

(Pangolin)

Leona Chemnick, Beckman Center for Conservations Research/CRES

KB16041

No sequence obtained

Sus scrofa

(Pig)

Novagen

69230

GenBank:FJ204919

Ornithorhynchus anatinus

(Platypus)

Frank Grützner, School of Molecular & Biomed. Sci., Univ. Adelaide, Australia

GenBank:FJ204918

Oryctolagus cuniculus

(Rabbit)

Pamela Gehron Robey, NIDCR, NIH, Bethesda, MD

bone marrow stromal cells, P5

GenBank:FJ204920

Rattus norvegicus

(Rat)

GenBank

NM_012790

Macaca mulatta

(Rhesus Macaque)

UCSC Genome Browser

Jan 2006, rheMac2

Blarina brevicauda

(Shrew, Northern short-tailed)

Mr. Jack Hubley, Lititz, PA

No sequence obtained

Sorex araneus

(Shrew, Common)

UCSC Genome Browser

June 2006, sorAra1

Sorex ornatus

(Shrew, Ornate)

Leona Chemnick, Beckman Center for Conservations Research/CRES

KB13763

No sequence obtained

Ateles geoffroyi

(Spider Monkey)

Coriell Cell Repositories, Coriell Institute for Medical Research

NG05352

GenBank:FJ204922

Spermophilus tridecemlineatus

(Squirrel)

UCSC Genome Browser

Feb 2008, speTri1

Tarsier syrichta

(Tarsier)

UCSC Genome Browser

Aug 2008, tarSyr1

Balaena mysticetus

(Whale, Bowhead (baleen))

Southwest Fisheries Science Center, La Jolla, CA

Z 11215, BMYS981022

GenBank:FJ204924

GenBank:FJ204925

Balaenoptera physalus

(Whale, Fin)

Southwest Fisheries Science Center, La Jolla, CA

Z 25397, DSJ010903.01

No sequence obtained

Physeter macrocephalus

(Whale, Sperm)

Southwest Fisheries Science Center, La Jolla, CA

Z 49068, MAC050820.05

No sequence obtained


McKnight and Fisher BMC Evolutionary Biology 2009 9:299   doi:10.1186/1471-2148-9-299

Open Data