Table 1

Group I Nme proteins: names and symbols by species, accession numbers and corresponding chromosomal location

Species

Name

Other names

GenBank Acc #

Ensembl Acc #

Localisation

Position


C. intestinalis

NmeGp1CiA

NDK B

XP_002123476

ENSCINP00000011619

Chr 8q

5,908,347-5,908,808

C. intestinalis

NmeGp1CiB

XP_002121438

ENSCINP00000002194

Chr 2q

7,888,026-7,888,562

NmeGp1

B. floridae

NmeGp1BfA

XP_002206993

Chr Un

116,102,546-116,104,838

B. floridae

NmeGp1BfB

XP_002206992

Chr Un

116,092,575-116,094,429

P. marinus

Nme2

FD722053*

P. marinus

Nme3/4

FD718234*

Contig24671

6,345-8,952


H. sapiens

NME1

NDK A; NM23-H1; GAAD

NP_937818

ENSP00000337060

Chr 17

46,585,919-46,594,449

M. musculus

Nme1

NDK A; Nm23-M1

NP_032730

ENSMUSP00000021220

Chr 11

93,820,547-93,829,574

B. taurus

Nme1

NDK A; NDKA2; NBR-A

NP_991387

ENSBTAP00000006104

Chr 19

36,634,791-36,645,841

Nme1

M. domestica

Nme1

LOC100012868

XP_001363771

ENSMODP00000015750

Chr 2

184,090,725-184,104,175

O. anatinus

Nme1

ENSOANP00000018628

SuperContig 18222

1,054-2,769

G. gallus

Nme1

Nm23A

XP_420097

ENSGALP00000011811

Chr18

9,930,932-9,933,309

A. carolinensis

Nme1

ENSACAESTP00000008767

Scaffold_268

1,710,978-1,717,896


H. sapiens

NME2

NDK B; NM23-H2; PUF

NP_001018149

ENSP00000376888

Chr 17

46,598,821-46,604,103

M. musculus

Nme2

NDK B; Nm23-M2

NP_032731

ENSMUSP00000021217

Chr 11

93,811,130-93,817,195

B. taurus

Nme2

NDK B; PUF

NP_001069844

Chr 19

36,625,295-36,629,092

Nme2

M. domestica

Nme2

NDK B

XP_001363684

ENSMODP00000015743

Chr 2

184,076,307-184,081,978

O. anatinus

Nme2

ENSOANP00000018629

SuperContig 18222

6,818-8,864

G. gallus

Nme2

CNDPK; NDK_CHICK

NP_990378

ENSGALP00000034078

Chr18

5,062,096-5,064,054

A. carolinensis

Nme2

ENSACAESTP00000008779

Scaffold_268

1,724,830-1,729,637

X. tropicalis

Nme2

NME1

NP_001005140

ENSXETP00000024764

Scaffold_673

77,640-81,451


H. sapiens

NMELV

NME1-NME2

NP_001018146

ENSP00000376894

Chr 17

49,230,997-49,249,103

P. troglodytes

NmeLV

NME1-NME2

XP_511889

ENSPTRP00000044657

Chr 17

50,152,238-50,171,443

Nme-LV

E. caballus

NmeLV

NME1-NME2

XP_001499951

ENSECAP00000019175

Chr 11

26,692,478-26,707,469

B. taurus

NmeLV

NDKB-BOVIN

ENSBTAP00000041066

Chr 19

36,625,292-36,645,867

O. anatinus

NmeLV

NME1-NME2

XP_001515701

SuperContig18222

1057-8751

A. carolinensis

NmeLV

ENSACAP00000002161

Scaffold_268

1,706,438-1,729,637


D. rerio

Nme2a

NM23B; nme2l

NP_956264

ENSDARP00000064338

Chr 20

5,310,868-5,319,057

O. latipes

Nme2a

ENSORLP00000018429

Chr 19

21,821,808-21,827,808

Nme2a

G. aculeatus

Nme2a

ENSGACP00000020117

Scaffold_48

706,609-708,477

T. nigroviridis

Nme2a

CAF90396

ENSTNIP00000005730

Chr Un_random

34,843,841-34,848,064

T. rubripes

Nme2a

ENSTRUP00000014520

Scaffold_29

678,695-680,960


D. rerio

Nme2b1

nme2; nme1; ndpkz1; NM23B

NP_571001

ENSDARP00000074169

Scaffold Zv7_NA1913

1,772-2,772

Nme2b

D. rerio

Nme2b2

Ndpkz2

NP_571002

Scaffold Zv7_NA1913

8,750-9,346

O. latipes

Nme2b

NDKA; GAAD; NME1-NME2

ENSORLP00000023099

Scaffold1014

323-3,121

T. rubripes

Nme2b

NDKA; GAAD

ENSTRUP00000001870

Scaffold_307

158,498-160,002


H. sapiens

NME3

NDPKC; DR-nm23; NM23-H3

NP_002504

ENSP00000219302

Chr 16

1,760,323-1,761,711

M. musculus

Nme3

NDPKC; DR-nm23; Nm23-M3

NP_062704

ENSMUSP00000024978

Chr 17

25,033,459-25,034,448

G. gallus

Nme3

NDPKC; DR-nm23

XP_414714

ENSGALP00000003531

Chr 14

13,989,877-13,991,647

A. carolinensis

Nme3

NDPKC; NDK 3; DR-nm23

ENSACAP00000003455

Scaffold_1065

123,674-128,641

Nme3

X. tropicalis

Nme3

MGC89980

NP_001005115

ENSXETP00000022770

Scaffold_27

933,363-937,018

D. rerio

Nme3

ndpkz3; NDPK-Z3

NP_571003

ENSDARP00000075112

Chr 3

13,184,712-13,194,308

O. latipes

Nme3

NDK 3; NDPKC; DR-nm23

ENSORLP00000014699

Chr 8

15,106,871-15,109,573

G. aculeatus

Nme3

NDK 3; NDPKC; DR-nm23

ENSGACP00000017241

GroupXI

12,674,486-12,677,154

T. rubripes

Nme3

NDK 3; NDPKC; DR-nm23

ENSTRUP00000011464

Scaffold_294

107,469-108,977

T. nigroviridis

Nme3

NDK 3; NDPKC; DR-nm23

CAG02649

ENSTNIP00000014528

Chr Un_random

6,812,965-6,814,848


H. sapiens

NME4

NDPKD; NM23-H4

NP_005000

ENSP00000219479

Chr 16

387,193-390,754

M. musculus

Nme4

NDPKD; Nm23-M4

NP_062705

ENSMUSP00000025007

Chr 17

26,228,682-26,232,433

G. gallus

Nme4

NDPKD

AAB99857

Chr 14

13,763,108-13,764,673

A. carolinensis

Nme4

ENSACAP00000016602

scaffold_1361

31,704-32,514

Nme4

X. tropicalis

Nme4

NP_001039239

ENSXETP00000022726

Scaffold_27

1,305,654-1,312,714

D. rerio

Nme4

zgc:56482

NP_957489

ENSDARP00000060403

Chr 3

14,178,447-14,192,697

O. latipes

Nme4

NDPKD

ENSORLP00000014089

Chr 8

14,902,635-14,905,718

G. aculeatus

Nme4

NDPKD

ENSGACP00000016999

GroupXI

12,533,938-12,535,079

T. rubripes

Nme4

NDPKD

ENSTRUP00000012573

Scaffold_112

81,060-82,895

T. nigroviridis

Nme4

NDPKD

CAG12673

ENSTNIP00000022136

Chr Un_random

7,826,243-7,828,703


Protein names were retrieved from Genbank, Ensembl, iHOP and ZFIN. Location was obtained using Ensembl genome browser, or by UCSC Genome Bioinformatics BLAT when not available on Ensembl. *, sequence is an EST. †, incomplete sequence.

Desvignes et al. BMC Evolutionary Biology 2009 9:256   doi:10.1186/1471-2148-9-256

Open Data