Research article
Investigations of fine-scale phylogeography in Tigriopus californicus reveal historical patterns of population divergence
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* Corresponding author: Christopher S Willett willett4@email.unc.edu
1 Department of Biology, University of North Carolina, Chapel Hill, Chapel Hill NC 27599-3280, USA
2 Current address: Hopkins Marine Station of Stanford University, Department of Biological Sciences, Oceanview Blvd, Pacific Grove 93950, USA
BMC Evolutionary Biology 2009, 9:139 doi:10.1186/1471-2148-9-139
Published: 23 June 2009Additional files
Additional file 1:
Table S1. Sampling locations for Tigriopus californicus in southern and central California.
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Additional file 2:
Table S2. Primers used for PCR amplifications for the CYTB and RISP genes from T. californicus.
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Additional file 3:
CYTB sequences in Arlequin format. This file contains the CYTB sequences from each of the four regions and additional sites (in non-interleaved Arlequin format).
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Additional file 4:
RISP sequences in Nexus format. This file contains the RISP sequences in nexus file format (interleaved sequences).
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Additional file 5:
Table S3. Pairwise percent sequence divergence between selected haplotypes for CYTB.
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Additional file 6:
Table S4. FST values for CYTB from Arlequin based on pairwise comparisons of populations (pairwise sequence divergence).
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Additional file 7:
Table S5. Measures of the departures of the frequency spectra within regions and sites from neutral expectations.
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Additional file 8:
Table S6. FST values for RISP from Arlequin based on pairwise comparisons of populations (pairwise sequence divergence).
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Additional file 9:
Table S7. RISP nucleotide and indel variation found in Santa Cruz region and PES for T. californicus.
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Additional file 10:
Table S8. RISP nucleotide and indel variation found in La Jolla region for T. californicus.
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Additional file 11:
Table S9. RISP nucleotide and indel variation found in Palos Verdes region for T. californicus.
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