Research article
Molecular phylogeny of ocelloid-bearing dinoflagellates (Warnowiaceae) as inferred from SSU and LSU rDNA sequences
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* Corresponding author: Mona Hoppenrath mhoppenrath@senckenberg.de
1 Departments of Botany and Zoology, University of British Columbia, 6270 University Boulevard, Vancouver, BC, V6T 1Z4, Canada
2 Smithsonian Environmental Research Center, Edgewater, MD 21037-0028, USA
3 Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742-4407, USA
4 Current address : Forschungsinstitut Senckenberg, Deutsches Zentrum für Marine Biodiversitätsforschung (DZMB), Südstrand 44, D-26382 Wilhelmshaven, Germany
BMC Evolutionary Biology 2009, 9:116 doi:10.1186/1471-2148-9-116
Published: 25 May 2009Additional files
Additional file 1:
LSU rDNA phylogeny. Gamma-corrected maximum likelihood tree (-lnL = 4115.21736, α = 0.742, 4 rate categories) inferred using the GTR model of substitution on an alignment of 47 LSU rDNA sequences and 358 unambiguously aligned sites. Numbers at the branches denote bootstrap percentages using maximum likelihood – GTR (top) and Bayesian posterior probabilities – GTR (bottom). Black dots on branches denote bootstrap percentages and posterior probabilities of 95% or higher. Sequences derived from this study are highlighted in black boxes.
Format: ZIP Size: 493KB Download file
Additional file 2:
Concatenated SSU and LSU rDNA phylogeny. Gamma-corrected maximum likelihood tree (-lnL = 10274.67788, α = 0.496, 4 rate categories) inferred using the GTR model of substitution on an alignment of 17 combined SSU and LSU rDNA sequences and 2549 unambiguously aligned sites. Numbers at the branches denote bootstrap percentages using maximum likelihood – GTR (top) and Bayesian posterior probabilities – GTR (bottom). Black dots on branches denote bootstrap percentages and posterior probabilities of 95% or higher. Sequences derived from this study are highlighted in black boxes.
Format: ZIP Size: 193KB Download file