Table 1

ANOVA with response variable stQD.

Parameters

NJ

MP

ML

SIAa

SIAb


length

***

***

***

***

***

rate

*

***

**

*

seqs

***

***

***

***

***

topol

***

***

***

**

***

gap

***

***

***

***

***

length:rate

**

**

length:seqs

***

***

***

*

***

rate:seqs

***

***

length:topol

***

***

**

rate:topol

***

***

***

***

**

seqs:topol

***

***

***

***

**

length:gap

***

***

***

***

**

rate:gap

***

seqs:gap

***

***

***

***

***

topol:gap

***

***

***

***

***

length:rate:seqs

length:rate:topol

***

*

**

**

**

length:rate:topol

***

***

***

***

rate:seqs:topol

length:rate:gap

length:seqs:gap

***

***

***

***

***

rate:seqs:gap

***

length:topol:gap

**

***

***

***

***

rate:topol:gap

seqs:topol:gap

***

***

***

***

length:rate:seqs:topol

*

length:rate:seqs:gap

*

length:rate:topol:gap

length:seqs:topol:gap

***

*

***

***

rate:seqs:topol:gap

length:rate:seqs:topol:gap


p ≤ 0.001***, p ≤ 0.01**, p ≤ 0.05*; parameters: length = alignment length; rate = evolutionary rate; seqs = number of sequences in the alignment; topol = tree topology of true tree; gap = gap pattern applied to full alignment. SIAa refers to the full SIA trees, while SIAb refers to the pruned SIA trees.

Hartmann and Vision BMC Evolutionary Biology 2008 8:95   doi:10.1186/1471-2148-8-95

Open Data