PhyloSort: a user-friendly phylogenetic sorting tool and its application to estimating the cyanobacterial contribution to the nuclear genome of Chlamydomonas

doi:10.1186/1471-2148-8-6

BMC Evolutionary Biology

Volume 8

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PhyloSort: a user-friendly phylogenetic sorting tool and its application to estimating the cyanobacterial contribution to the nuclear genome of Chlamydomonas

Ahmed Moustafa¹ and Debashish Bhattacharya¹^,2

¹University of Iowa, Interdisciplinary Program in Genetics, 456 Biology Building, Iowa City, Iowa 52242, USA

²University of Iowa, Department of Biological Sciences and the Roy J. Carver Center for Comparative Genomics, 446 Biology Building, Iowa City, Iowa 52242, USA

author email corresponding author email

BMC Evolutionary Biology 2008, 8:6doi:10.1186/1471-2148-8-6


Published:	15 January 2008

Additional files

Additional file 1:

Genes and Trees. The list is presented of the 531 Chlamydomonas proteins that form a monophyletic clade with cyanobacteria and other photosynthetic eukaryotes. The list includes the inferred phylogenetic tree for each gene and the associated GO annotation.

Format: XLS Size: 3.2MB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional file 2:

Gene Ontology. The results of the gene ontology (GO) analysis (format: Microsoft Word Document).

Format: DOC Size: 48KB Download file

This file can be viewed with: Microsoft Word Viewer