Table 1 |
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|
Observed haplotypes, Genbank references and collection locations of samples used in this study. |
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| Map codes |
Localities |
Haplotype |
Genbank accession number |
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|
|
|
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| COII |
ITS2 |
COII |
ITS2 |
||
|
|
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| 1 |
Elba |
C2 |
C |
EF591525 |
EF591552 |
| 2 |
Luri |
C2 |
C |
EF591533 |
EF591553 |
| 3 |
Bastia |
L1 |
L |
EF591507 |
EF591540 |
| 4 |
Pioggiola |
C2 |
- |
EF591534 |
- |
| 5 |
Ponte Leccia |
C2 |
- |
EF591524 |
- |
| 6 |
Valle d'Alesani |
C2 |
L |
EF591535 |
EF591541 |
| 7 |
Evisa |
C1 |
- |
EF591519 |
- |
| 8 |
Piana |
C1 |
- |
EF591517 |
- |
| 9 |
Bocognano |
C1 |
- |
EF591518 |
- |
| 10 |
Ajaccio |
||||
| - A |
C1 |
C |
EF591516 |
EF591554 |
|
| - B |
C2 |
C |
EF591523 |
EF591555 |
|
| 11 |
Solenzara |
C1 |
C |
EF591515 |
EF591556 |
| 12 |
Propriano |
C1 |
- |
EF591520 |
- |
| 13 |
Sartène |
C1 |
C |
EF591521 |
EF591557 |
| 14 |
Porto-Vecchio |
C2 |
- |
EF591536 |
- |
| 15 |
Bonifacio |
C2 |
- |
EF591538 |
- |
| 16 |
La Maddalena |
C1 |
C |
EF591537 |
EF591558 |
| 17 |
Sacchedu |
C2 |
- |
AF291730 |
- |
| 18 |
Algherro |
C2 |
- |
AF291729 |
- |
| 19 |
Cagliari |
C2 |
C |
EF591539 |
EF591559 |
| 20 |
Pula |
C2 |
- |
AY267861 |
- |
| 21 |
St Rémy |
L2 |
L |
EF591498 |
EF591542 |
| 22 |
Salon de Provence |
L2 |
L |
EF591501 |
EF591543 |
| 23 |
Plan de Cuques |
L2 |
H* |
EF591500 |
EF591563 |
| 24 |
Martigues |
L2 |
H* |
EF591497 |
EF591565 |
| 25 |
Bouc Bel Air |
L2 |
L |
EF591502 |
EF591544 |
| 26 |
Vitrolles |
||||
| - A |
C2 |
H |
EF591499 |
EF591567 |
|
| - B |
- |
H** |
- |
EF591568 |
|
| 27 |
Marseille |
||||
| - A |
L2 |
L |
EF591494 |
EF591545 |
|
| - B |
L2 |
H* |
EF591495 |
EF591564 |
|
| 28 |
- C |
C1 |
C |
EF591496 |
EF591560 |
| 29 |
- O |
C2 |
H |
EF591493 |
EF591566 |
| 30 |
Bologna |
L3 |
- |
AF291723 |
- |
| 31 |
Forli |
L1 |
- |
AF291725 |
- |
| 32 |
Firenze |
L4 |
- |
AF291726 |
- |
| 33 |
Torre del Lago |
L4 |
L |
EF591514 |
EF591546 |
| 34 |
Macchia Lucchese |
||||
| - A |
L4 |
- |
EF591511 |
- |
|
| - B |
L4 |
- |
EF591512 |
- |
|
| 35 |
Viareggio |
C2 |
C |
EF591522 |
EF591561 |
| 36 |
Migliarino |
L3 |
- |
EF591509 |
- |
| 37 |
Castiglioncello |
L4 |
C |
EF591513 |
EF591562 |
| 38 |
Marina di Bibbona |
L4 |
- |
EF591510 |
- |
| 39 |
Populonia |
L3 |
- |
EF591508 |
- |
| 40 |
Follonica |
C2 |
L |
EF591503 |
EF591547 |
| 41 |
Uccelina |
||||
| - genbank |
C2 |
- |
AF291727 |
- |
|
| - 0 |
C2 |
- |
EF591526 |
- |
|
| - 1 |
C2 |
- |
EF591527 |
- |
|
| - 2 |
C2 |
- |
EF591528 |
- |
|
| - 3 |
C2 |
L |
EF591529 |
EF591548 |
|
| - 4 |
C2 |
- |
EF591530 |
- |
|
| - 5 |
C2 |
- |
EF591531 |
- |
|
| 42 |
Giannella |
C2 |
L |
EF591532 |
EF591549 |
| 43 |
Patanella |
L3 |
- |
AF525341 |
- |
| 44 |
Roma |
L1 |
L |
AF291729 |
EF591550 |
| 45 |
Grottaferrata |
L2 |
- |
EF591504 |
- |
| 46 |
Anzio |
L2 |
- |
EF591505 |
- |
| 47 |
Sabbaudia |
L2 |
- |
EF591506 |
- |
| 48 |
Castel di Decima |
L3 |
L |
AF291724 |
EF591551 |
| 49 |
Rosarno |
L5 |
- |
AY267863 |
- |
| 50 |
Palermo |
S1 |
- |
AY267857 |
- |
| 51 |
Agrigiento |
S1 |
- |
AY267864 |
- |
|
|
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|
The haplotype code refers to phylogeny or sequencing alignments obtained according to the different nuclear or mitochondrial markers. C = R. l. corsicus. L = R. lucifugus. S = "sicilian" R. lucifugus. |
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|
Lefebvre et al. BMC Evolutionary Biology 2008 8:38 doi:10.1186/1471-2148-8-38 |
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