Additional file 2.

Additional information on PS genes identified in Shewanellaceae family. In colums A-H are reported respectively: internal database ID, NCBI Locus Tag, TrEMBL ID, NCBI gene annotation, COG category, statistic q-value, total number of amino acids and of PS sites for each S. benthica KT99 orthologue. All reported TrEMBL IDs and COG annotations refer to S. oneidensis MR1. The ω values obtained with PAML software for the six pair-comparisons and CAI values calculated for each bacterium are reported in M and N. In the table are also highlighted common PS genes between SS9 and KT99 (underlined) and genes with overabundant mutation regions (red). Organism names are abbreviated as follows: S benthica KT99 (P), S. oneidensis (S1), S. frigidimarina (S2) and S. baltica (S3).

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Campanaro et al. BMC Evolutionary Biology 2008 8:313   doi:10.1186/1471-2148-8-313