Relationships of gag-pol diversity between Ty3/Gypsy and Retroviridae LTR retroelements and the three kings hypothesis

doi:10.1186/1471-2148-8-276

BMC Evolutionary Biology

Volume 8

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Research article

Relationships of gag-pol diversity between Ty3/Gypsy and Retroviridae LTR retroelements and the three kings hypothesis

Carlos Llorens¹^,2 , Mario A Fares³ and Andres Moya¹^,4

¹Institut Cavanilles de Biodiversitat i Biología Evolutiva, Universitat de València, Polígono de la coma S/N, Paterna, Valencia, Spain

²Biotechvana, Parc Cientific, Universitat de Valencia, Paterna, Lab 16D Polígono de la coma S/N, Paterna, Valencia, Spain

³Department of Genetics, University of Dublín, Trinity Collage Dublín, Dublín 2, Ireland

⁴CIBER de Epidemiología y Sal ud Pública (CIBERESP), Spain

author email corresponding author email

BMC Evolutionary Biology 2008, 8:276doi:10.1186/1471-2148-8-276


Published:	8 October 2008

Additional files

Additional File 1:

Expanding gag-pol phylogeny. Expanded version of gag-pol tree illustrated in Figure 1 inferred based on the 120 Ty3/Gypsy and Retroviridae LTR retroelements used in this study. The tree includes information about the names, Genbank accessions and hosts of all LTR retroelement taxa used. By clicking the name of each OTU, the user can locate a file at GyDB providing information of the sequence selected, including a link to its Genbank accession at NCBI.

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