Table 2 |
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|
Codon-based Test of Purifying Selection between sequences |
||||||||
|
H.s. |
P.t. |
P.p.a. |
P.p. |
M.m. |
C.a. |
S.s. |
C.j. |
|
|
|
||||||||
|
H.s. |
2.456 |
2.707 |
2.661 |
3.244 |
4.466 |
3.967 |
5.856 |
|
|
P.t. |
0.008 |
3.852 |
3.750 |
3.665 |
4.862 |
4.290 |
5.939 |
|
|
P.p.a. |
0.004 |
0.000 |
0.978 |
3.044 |
4.253 |
4.362 |
6.381 |
|
|
P.p. |
0.004 |
0.000 |
1.000 |
2.986 |
4.143 |
4.167 |
6.225 |
|
|
M.m. |
0.001 |
0.000 |
0.001 |
0.002 |
4.289 |
3.706 |
6.282 |
|
|
C.a. |
0.000 |
0.000 |
0.000 |
0.000 |
0.000 |
4.927 |
7.217 |
|
|
S.s. |
0.000 |
0.000 |
0.000 |
0.000 |
0.000 |
0.000 |
6.005 |
|
|
C.j. |
0.000 |
0.000 |
0.000 |
0.000 |
0.000 |
0.000 |
0.000 |
|
|
|
||||||||
|
Test of purifying selection (codon-based Z-test). Upper triangle: Z-value and the lower triangle P-values. Analyses were conducted using the Nei-Gojobori method and Z-value variance was computed using 500 bootstrap replicates. H.s.: Human (Homo sapiens); P.t.: Chimpanzee (Pan troglodytes); P.p.a.: S. orangutan (Pongo pygmaeus abelii); P.p.: B. orangutan (Pongo pygmaeus); M.m.: Macaque (Macaca mulatta); C.a.: African green monkey (Cercopithecus aethiops); S.s.: Squirrel monkey (Saimiri sciureus); C.j.: Marmoset (Callithrix jacchus) |
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|
Kjeldbjerg et al. BMC Evolutionary Biology 2008 8:266 doi:10.1186/1471-2148-8-266 |
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