Table 3

List of the taxa examined in this study and their GenBank accession numbers.

Famille

Taxa

cyt b

IRBP

GHR


Murinae

Aethomys chrysophilus

AJ604515

AY326075

NA

Apodemus argenteus

AB032848

AB032855

NA

Apodemus flavicollis

AB032853

AB032860

AM910943*

Apodemus mystacinus

AF159394

AJ311158

AM910942*

Apodemus speciosus

AB032849

AB032856

NA

Apodemus sylvaticus

AB033695

AB032863

NA

Apomys hylocoetes

AY324467

NA

AY294915

Archboldomys luzonensi

AY324460

DQ191495

NA

Arvicanthis niloticus

AF004569

DQ022386*

AM910944*

Arvicanthis somalicus

AF004573

NA

AY294918

Bandicota bengalensis

AM408340

AM408331

AM910945*

Batomys granti

AY324459

DQ191496

AY294917

Berylmys bowersii

AM408337

AM407896

AM910946*

Bunomys chrysocomus

AM910934*

AM910937*

AM910947*

Chrotomys gonzalensi

AY324461

DQ191503

NA

Colomys goslingi

AF518372

DQ022395 *

AM910948*

Conilurus penicilatus

AM910935*

AM910938*

AM910949*

Cremnomys cutchicus

DQ022381

DQ022384

NA

Dasymys incomtus

AF141217

EU292143*

AM910950*

Desmomys harringtoni

AF141206

EU292144*

NA

Diplothrix legata

AB033696

AB033706

NA

Golunda ellioti

AM408338

AM408332

AM910951*

Grammomys macmillani

AM408345

AM408329

AM910980*

Grammomys sp.

AF141218

DQ022389

AM910952*

Heimyscus fumosus

AF518333

DQ022397*

AM910953*

Hybomys univittatus

AF141219

DQ022388*

DQ019059

Hydromys chrysogaster

AM408339

AM408319

AM910954*

Hylomyscus parvus

AF518330

DQ022399

DQ019060

Hylomyscus stella

AF518331

AM408320

AM910955*

Lemniscomys striatus

AF141210

AM408321

AM910956*

Leopoldamys edwardsi

AJ698881

AJ698897

NA

Malacomys edwardsi

DQ022379

DQ022392*

AM910958*

Malacomys longipes

AM408341

DQ022393*

AM910957*

Mastomys erythroleucus

AF518338

AM408335

AM910959*

Mastomys natalensis

AF518342

AY518342

NA

Mastomys pernanus

AF518343

DQ022403*

AM910960*

Mastomys kollmannspergeri

AF518345

DQ022402*

AM910961*

Maxomys whiteheadi

EU292150*

AY326094

NA

Micaelamys namaquensis

AF141215

AM408330

AY294914

Micromys minutus

AB033697

AB033710

NA

Millardia kathleenae

EU292148*

EU292145*

AM910963*

Millardia meltada

AF141221

AM408322

AM910962*

Mus (Coelomys) crociduroides

AJ698878

AJ698894

AM910964*

Mus (Nannomys) minutoides

AY057816

AJ875086

NA

Mus (Mus) musculus

V00711

AB033711

AY271378

Mus (Pyromys) platythrix

AJ698880

AJ698895

NA

Mylomys dybowski

AF141212

EU292146*

AM910965*

Myomyscus brockmani

AF518353

DQ022407*

AM910966*

Myomyscus verreauxii

AF518355

DQ022408*

AM910967*

Myomyscus yemeni

AF518357

DQ022409*

AM910968*

Niviventer niviventer

AM408344

AM408323

AM910969*

Oenomys hypoxanthus

AM408342

AM408324

AM910970*

Otomys angoniensis

AM408343

AM408325

AM910971*

Parotomys sp.

NA

NA

AY294912

Pelomys fallax

DQ022382

DQ022391

NA

Phloeomys cumingi

DQ191484

AY326103

DQ019076

Praomys daltoni

AF518349

DQ022406*

AM910972*

Praomys degraaffi

AF518359

DQ022410

NA

Praomys jacksoni

AF518361

AM408326

AM910973*

Praomys misonnei

AF518364

DQ022412

NA

Praomys tullbergi

AF518365

AM408327

AM910974*

Praomys verschureni

AF518373

DQ022394*

NA

Pseudomys australis

AM910936*

AM910939*

AM910975*

Rattus exulans

DQ191486

AY326105

DQ019074

Rattus norvegicus

VO1556

AB033714

J04811

Rattus rattus

AB033702

AM408328

AM910976*

Rattus tanezumi

AB096841

AB096856

NA

Rhabdomys pumilio

AF141214

AY326106

AY294913

Rhynchomys isarogensis

AY324462

AY326108

DQ019075

Stenocephalemys albipes

AF518347

DQ022404

AM910977*

Stenocephalemys albocaudata

AF518370

DQ022414*

AM910978*

Stochomys longicaudatus

EU292149*

EU292147*

DQ019076

Sundamys muelleri

AM408340

AY326111

AM910979*

Tokudaia osimensis

AB029429

AB033712

AM910981*

Zelotomys hildegardeae

AF518375

DQ022396*

DQ019080


Deomyinae

Acomys

AJ233953 (cahirinus)

AJ698898 (cahirinus)

AY294923 (ignitus)

Deomys ferrugineus

NA

AY326084

AY294922

Lophuromys flavopunctatus

AY828236

AY326091

AY294921


Gerbillinae

Desmodillus auricularis

AJ851272

AM910940*

DQ019048

Gerbillurus paeba

AJ430557

AM910941*

NA

Gerbillus gerbillus

AJ851269

NA

DQ019049

Meriones

AF159405 (unguiculatus)

AY326095 (unguiculatus)

AF332021 (shawi)

Gerbilliscus robustus

AJ875234

AY326113

AY294920


*: newly acquired sequences. NA: sequence not available.

Lecompte et al. BMC Evolutionary Biology 2008 8:199   doi:10.1186/1471-2148-8-199

Open Data