Table 2

Information on the protist-type lysozymes
Species
 Gene
 Gene name/Protein ID
 Chromosome
 Prot. length
 MW
 pI
 Charge
 Hydropathy
C. elegans
 Cel-lys-1
 Y22F5A.4/CE16605
 V
 298
 32.4
 5.5
 -2
 0.031

Cel-lys-2
 Y22F5A.5/CE16606
 V
 279
 30.3
 6.3
 0
 -0.039

Cel-lys-3
 Y22F5A.6/CE20201
 V
 301
 33.8
 5.4
 -7
 -0.156

Cel-lys-4
 F58B3.1/CE06003
 IV
 214
 23.6
 7.0
 0
 -0.045

Cel-lys-5
 F58B3.2/CE06004
 IV
 215
 23.5
 6.9
 0
 -0.001

Cel-lys-6
 F58B3.3/CE06005
 IV
 214
 23.1
 6.0
 -2
 0.168

Cel-lys-7
 C02A12.4/CE07828
 V
 283
 30.9
 6.7
 0
 0.048

Cel-lys-8
 C17G10.5/CE06846
 II
 286
 31.0
 5.8
 -1
 0.031

Cel-lys-9
 C54C8.6/CE08969
 I
 179
 19.8
 9.8
 10
 -0.251

Cel-lys-10
 F17E9.11/CE07076
 IV
 230
 25.8
 8.6
 3
 -0.140
C. briggsae
 Cbr-lys-1
 CBG09572/CBP08248
 V
 291
 31.3
 7.7
 1
 0.171

Cbr-lys-2
 CBG09573/CBP08249
 V
 276
 30.0
 6.3
 0
 -0.022

Cbr-lys-3
 CBG09574/CBP08250
 V
 300
 33.9
 5.2
 -12
 -0.132

Cbr-lys-6.1
 CBG06111/CBP07239
 IV
 214
 23.1
 7.7
 1
 0.133

Cbr-lys-6.2
 CBG06114/CBP21696
 IV
 216
 23.5
 6.9
 0
 0.014

Cbr-lys-8
 CBG02448/CBP00589
 II
 282
 30.4
 6.2
 0
 0.112

Cbr-lys-10
 CBG06112/CBP01531
 IV
 214
 23.5
 6.4
 -2
 -0.019
C. remanei
 Cre-lys-1
 cr01.sctg13.wum.291.1
 sctg13
 293
 31.6
 7.7
 1
 0.185

Cre-lys-2
 cr01.sctg13.wum.292.1
 sctg13
 288
 31.1
 6.6
 0
 0.092

Cre-lys-3
 cr01.sctg13.wum.297.1
 sctg13
 315
 35.7
 4.9
 -12
 -0.195

Cre-lys-6
 cr01.sctg3655.wum.3.1
 sctg3655
 214
 23.2
 7.7
 1
 0.070

Cre-lys-8.1
 cr01.sctg9.wum.10.1
 sctg9
 285
 31.1
 5.5
 -1
 -0.015

Cre-lys-8.2
 cr01.sctg9.wum.67.1
 sctg9
 282
 30.7
 6.6
 0
 0.037

Cre-lys-10
 cr01.sctg32.wum.160.1
 sctg32
 214
 23.6
 6.4
 -2
 -0.019

Location of C. remanei genes can only be attributed to supercontigs (sctg). MW, molecular weight, to be multiplied by 1000. Isoelectric point (pI), charge, and grand average of hydropathy were calculated with the help of the ProtParam tool of the ExPASy server.

Schulenburg and Boehnisch BMC Evolutionary Biology 2008 8:114   doi:10.1186/1471-2148-8-114