  Research articleAnalysis of epistatic interactions and fitness landscapes using a new geometric approachNiko Beerenwinkel1 1Program for Evolutionary Dynamics, Harvard University, Cambridge, MA 02138, USA 2Department of Mathematics, University of California, Berkeley, CA 94720, USA 3Instituto de Biología Molecular y Celular de Plantas, Consejo Superior de Investigaciones Científicas-UPV, 46022 València, Spain 4Department of Microbiology and Molecular Genetics, Michigan State University, East Lansing, MI 48824, USA
BMC Evolutionary Biology 2007, 7:60doi:10.1186/1471-2148-7-60
Additional filesAdditional file 1: Instructions for calculating the Markov basis and triangulation of a dataset with Macaulay 2. Format: PDF Size: 96KB Download file This file can be viewed with: Adobe Acrobat Reader Additional file 2: Macaulay 2 file for computing Markov bases of interaction spaces and triangulations of genotopes. (This program requires Macaulay 2 version 0.0.95 to be installed. See additional file 1 for instructions.) Format: M2 Size: 4KB Download file Additional file 3: Examples of fitness landscape files to be processed with the program fitness.m2 (additional file 2). Format: ZIP Size: 2KB Download file Additional file 4: Minimal Markov basis of the interaction space. Format: TXT Size: 3KB Download file |
|
 |  | Log on / register Feedback | Support |
on Google Scholar
author email
corresponding author email|
|
| © 1999-2008 BioMed Central Ltd unless otherwise stated |