BEAST: Bayesian evolutionary analysis by sampling trees
-
* Corresponding author: Alexei J Drummond alexei@cs.auckland.ac.nz
BMC Evolutionary Biology 2007, 7:214 doi:10.1186/1471-2148-7-214
Accesses
- Last 30 days: 986 accesses
- Last 365 days: 12181 accesses
- All time: 42146 accesses
Cited by
BioMed Central: 106 citations
|
Research article
Ling-Yun Chen, Jin-Ming Chen, Robert Gituru, Qing-Feng Wang BMC Evolutionary Biology 2012, 12:30 (10 March 2012) |
|
Research
Phylogenetic reconstruction of dengue virus type 2 in Colombia Jairo A Méndez, José A Usme-Ciro, Cristina Domingo, Gloria J Rey, Juan A Sánchez, Antonio Tenorio, Juan C Gallego-Gomez Virology Journal 2012, 9:64 (9 March 2012) |
|
Research
Fardo Witsenburg, Nicolas Salamin, Philippe Christe Malaria Journal 2012, 11:53 (22 February 2012) The main conclusion of this paper - that haemosporid parasites swtiched into mammals twice, which contradicts established dogma - was reached by means of the testing of a complex set of hypotheses using molecular tools.
|
|
Research article
Christine D Bacon, Miles J McKenna, Mark P Simmons, Warren L Wagner BMC Evolutionary Biology 2012, 12:23 (22 February 2012) |
|
Research article
Miao Miao, Zhaoqing Yang, Harland Patch, Yaming Huang, Ananias A Escalante, Liwang Cui BMC Evolutionary Biology 2012, 12:22 (17 February 2012) |
|
Research
HIV-1 Subtype distribution in morocco based on national sentinel surveillance data 2004-2005 Mohammed Akrim, Sanae Lemrabet, Elmir Elharti, Rebecca R Gray, Jean Tardy, Robert L Cook, Marco Salemi, Patrice Andre, Taj Azarian, Rajae Aouad AIDS Research and Therapy 2012, 9:5 (14 February 2012) |
|
Research article
Ze-Long Nie, Hang Sun, Steven R Manchester, Ying Meng, Quentin Luke, Jun Wen BMC Evolutionary Biology 2012, 12:17 (8 February 2012) |
|
Research article
Hugo Ramírez, Ramsés Reina, Luigi Bertolotti, Amaia Cenoz, Mirna-Margarita Hernández, Beatriz San Román, Idoia Glaria, Ximena de Andrés, Helena Crespo, Paula Jáuregui, Julio Benavides, Laura Polledo, Valentín Pérez, Juan F García-Marín, Sergio Rosati, Beatriz Amorena, Damián de Andrés BMC Veterinary Research 2012, 8:8 (26 January 2012) |
|
Research
HIV-1 Group P is unable to antagonize human tetherin by Vpu, Env or Nef Daniel Sauter, Stéphane Hué, Sarah J Petit, Jean-Christophe Plantier, Greg J Towers, Frank Kirchhoff, Ravindra K Gupta Retrovirology 2011, 8:103 (15 December 2011) The analyses of the two reported HIV-1 Group P viruses suggest that zoonosis occurred in the last 170 years and further support that pandemic HIV-1 Group M strains are better adapted to humans than non-pandemic or rare Group O, N and P viruses.
|
|
Research article
Molecular phylodynamics and protein modeling of infectious salmon anemia virus (ISAV) Eduardo Castro-Nallar, Marcelo Cortez-San Martín, Carolina Mascayano, Cristian Molina, Keith A Crandall BMC Evolutionary Biology 2011, 11:349 (2 December 2011) |
|
Research article
Integrative analyses of speciation and divergence in Psammodromus hispanicus (Squamata: Lacertidae) Patrick S Fitze, Virginia Gonzalez-Jimena, Luis M San-Jose, Diego San Mauro, Pedro Aragón, Teresa Suarez, Rafael Zardoya BMC Evolutionary Biology 2011, 11:347 (30 November 2011) |
|
Research article
Brian R Barber, Peter J Unmack, Marcos Pérez-Losada, Jerald B Johnson, Keith A Crandall BMC Evolutionary Biology 2011, 11:343 (25 November 2011) |
|
Research article
Sebastian Lippold, Nicholas J Matzke, Monika Reissmann, Michael Hofreiter BMC Evolutionary Biology 2011, 11:328 (14 November 2011) |
|
Research article
Leticia Bidegaray-Batista, Miquel A Arnedo BMC Evolutionary Biology 2011, 11:317 (31 October 2011) |
|
Methodology article
A Bayesian framework to estimate diversification rates and their variation through time and space Daniele Silvestro, Jan Schnitzler, Georg Zizka BMC Evolutionary Biology 2011, 11:311 (21 October 2011) |
|
Research article
Tracy R White, Michele M Conrad, Roger Tseng, Shaina Balayan, Rosemary Golding, António de Frias Martins, Benoît A Dayrat BMC Evolutionary Biology 2011, 11:295 (10 October 2011) |
|
Research article
Satish Kumar, Claire Bellis, Mark Zlojutro, Phillip E Melton, John Blangero, Joanne E Curran BMC Evolutionary Biology 2011, 11:293 (7 October 2011) |
|
Research article
Jan Štefka, Paquita EA Hoeck, Lukas F Keller, Vincent S Smith BMC Evolutionary Biology 2011, 11:284 (3 October 2011) Combining sequence data from rare mockingbirds and their host-specific parasites on the Galapogos Islands increases confidence in the inferred mockingbird phylogeny than using host data alone, leading to more accurate predictions about population structure and effective conservation.
|
|
Research article
Schmidtea mediterranea phylogeography: an old species surviving on a few Mediterranean islands? Eva M Lázaro, Abdul Harrath, Giacinta A Stocchino, Maria Pala, Jaume Baguñà, Marta Riutort BMC Evolutionary Biology 2011, 11:274 (26 September 2011) |
|
Research article
Y-chromosome phylogeny in the evolutionary net of chamois (genus Rupicapra) Trinidad Pérez, Sabine E Hammer, Jesús Albornoz, Ana Domínguez BMC Evolutionary Biology 2011, 11:272 (26 September 2011) |
|
Methodology article
Rate variation and estimation of divergence times using strict and relaxed clocks Richard P Brown, Ziheng Yang BMC Evolutionary Biology 2011, 11:271 (26 September 2011) |
|
Research article
Fernando Sequeira, Davidson Sodré, Nuno Ferrand, José AR Bernardi, Iracilda Sampaio, Horacio Schneider, Marcelo Vallinoto BMC Evolutionary Biology 2011, 11:264 (22 September 2011) |
|
Invited speaker presentation
Rosane Collevatti, Suelen Rabelo, Joao Nabout, Jose Diniz-Filho BMC Proceedings 2011, 5(Suppl 7):I3 (13 September 2011) |
|
Short report
Novel snake papillomavirus does not cluster with other non-mammalian papillomaviruses Christian E Lange, Claude Favrot, Mathias Ackermann, Jessica Gull, Elisabeth Vetsch, Kurt Tobler Virology Journal 2011, 8:436 (12 September 2011) |
|
Research article
Henk C den Bakker, Andrea I Moreno Switt, Gregory Govoni, Craig A Cummings, Matthew L Ranieri, Lovorka Degoricija, Karin Hoelzer, Lorraine D Rodriguez-Rivera, Stephanie Brown, Elena Bolchacova, Manohar R Furtado, Martin Wiedmann BMC Genomics 2011, 12:425 (22 August 2011) |
|
Research article
Inger Skrede, Ingeborg B Engh, Manfred Binder, Tor Carlsen, Håvard Kauserud, Mika Bendiksby BMC Evolutionary Biology 2011, 11:230 (4 August 2011) |
|
Research article
Maria M Bauzà-Ribot, Damià Jaume, Joan J Fornós, Carlos Juan, Joan Pons BMC Evolutionary Biology 2011, 11:221 (26 July 2011) |
|
Research article
Strength and tempo of selection revealed in viral gene genealogies Trevor Bedford, Sarah Cobey, Mercedes Pascual BMC Evolutionary Biology 2011, 11:220 (25 July 2011) |
|
Research article
Katharina C Wollenberg, David R Vieites, Frank Glaw, Miguel Vences BMC Evolutionary Biology 2011, 11:217 (21 July 2011) The small body size of members of the Mantellidae frog family results in limited dispersal capabilities and low physiological tolerances causing smaller, more fragmented ranges which facilitates reproductive isolation and may favor speciation.
|
|
Research
Mónica V Alvarado-Mora, Livia Botelho, Anna Nishiya, Raymundo A Neto, Michele S Gomes-Gouvêa, Maria F Gutierrez, Flair J Carrilho, João RR Pinho Virology Journal 2011, 8:345 (11 July 2011) |
|
Research
Suzanne English, Aris Katzourakis, David Bonsall, Peter Flanagan, Anna Duda, Sarah Fidler, Jonathan Weber, Myra McClure, Rodney Phillips, John Frater Retrovirology 2011, 8:54 (7 July 2011) We describe a highly unusual case consistent with a single donor transmitting highly related but distinct HIV-1 variants to two individuals on the same evening. We confirm that the clustering of viral genetic sequences present within each recipient is consistent with the history of a single donor across the viral env, gag and pol genes by maximum likelihood and Bayesian Markov Chain Monte Carlo based phylogenetic analyses. Based on an uncorrelated, lognormal relaxed clock of env gene evolution calibrated with other datasets, the time since the most recent common ancestor is estimated as 2.86 years prior to transmission (95% confidence interval 1.28 to 4.54 years). Our results show that an effective design for a preventative vaccine will need to anticipate extensive HIV-1 diversity within an individual donor as well as diversity at the population level.
|
|
Research article
David G Chapple, Conrad J Hoskin, Stephanie NJ Chapple, Michael B Thompson BMC Evolutionary Biology 2011, 11:191 (4 July 2011) |
|
Research article
Michelle R Gaither, Brian W Bowen, Tiana-Rae Bordenave, Luiz A Rocha, Stephen J Newman, Juan A Gomez, Lynne van Herwerden, Matthew T Craig BMC Evolutionary Biology 2011, 11:189 (1 July 2011) |
|
Research
Host shifts and molecular evolution of H7 avian influenza virus hemagglutinin Camille Lebarbenchon, David E Stallknecht Virology Journal 2011, 8:328 (28 June 2011) |
|
Research article
Masanori Nakatani, Masaki Miya, Kohji Mabuchi, Kenji Saitoh, Mutsumi Nishida BMC Evolutionary Biology 2011, 11:177 (22 June 2011) |
|
Research article
Andreia Miraldo, Godfrey M Hewitt, Octavio S Paulo, Brent C Emerson BMC Evolutionary Biology 2011, 11:170 (17 June 2011) |
|
Research
Juan F Masello, Petra Quillfeldt, Gopi K Munimanda, Nadine Klauke, Gernot Segelbacher, H Martin Schaefer, Mauricio Failla, Maritza Cortés, Yoshan Moodley Frontiers in Zoology 2011, 8:16 (15 June 2011) |
|
Research article
Gary Voelker, Jessica E Light BMC Evolutionary Biology 2011, 11:163 (14 June 2011) |
|
Research
Complete Columbian mammoth mitogenome suggests interbreeding with woolly mammoths Jacob Enk, Alison Devault, Regis Debruyne, Christine E King, Todd Treangen, Dennis O'Rourke, Steven L Salzberg, Daniel Fisher, Ross MacPhee, Hendrik Poinar Genome Biology 2011, 12:R51 (31 May 2011) A surprising mtDNA phylogeny suggests that North American woolly mammoths bred with the distinct Columbian mammoth species
|
|
Research
Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species Claudio Donati, N Luisa Hiller, Hervé Tettelin, Alessandro Muzzi, Nicholas J Croucher, Samuel V Angiuoli, Marco Oggioni, Julie C Dunning Hotopp, Fen Z Hu, David R Riley, Antonello Covacci, Tim J Mitchell, Stephen D Bentley, Morgens Kilian, Garth D Ehrlich, Rino Rappuoli, E Richard Moxon, Vega Masignani Genome Biology 2010, 11:R107 (29 October 2010) Streptococcus pneumoniae genome analysis reveals that the presence of pathogenicity genes is not sufficient to determine virulence
|
|
Proceedings
Assessing constancy of substitution rates in viruses over evolutionary time Ulrich Melcher BMC Bioinformatics 2010, 11(Suppl 6):S3 (7 October 2010) |
|
Research article
Bayesian random local clocks, or one rate to rule them all Alexei J Drummond, Marc A Suchard BMC Biology 2010, 8:114 (31 August 2010) How many different clocks govern the rate of evolution? Alexei Drummond and Marc Suchard address this question with Bayesian modeling of local clocks that tick at different rates in different parts of the phylogenetic tree.
|
|
Research article
Linda Y Rutledge, Brent R Patterson, Bradley N White BMC Evolutionary Biology 2010, 10:215 (16 July 2010) |
|
Research
Muhammad A Abbas, Erica Spackman, David E Swayne, Zaheer Ahmed, Luciana Sarmento, Naila Siddique, Khalid Naeem, Abdul Hameed, Shafqat Rehmani Virology Journal 2010, 7:137 (24 June 2010) |
|
Research article
Tingting Xu, Richard J Abbott, Richard I Milne, Kangshan Mao, Fang K Du, Guili Wu, Zhaxi Ciren, Georg Miehe, Jianquan Liu BMC Evolutionary Biology 2010, 10:194 (22 June 2010) Geographic isolation within the Qinghai-Tibetan Plateau probably promoted allopatric divergence in Asian cypress species by restricting gene flow and fixing local, species-specific haplotypes, while periods of unfavorable climate and human activity might have caused the low intraspecific diversity.
|
|
Research article
Mastacembelid eels support Lake Tanganyika as an evolutionary hotspot of diversification Katherine J Brown, Lukas Rüber, Roger Bills, Julia J Day BMC Evolutionary Biology 2010, 10:188 (19 June 2010) |
|
Research article
Positive selection of HIV host factors and the evolution of lentivirus genes Katarzyna Bożek, Thomas Lengauer BMC Evolutionary Biology 2010, 10:186 (18 June 2010) |
|
Research article
Ullasa Kodandaramaiah, David C Lees, Chris J Müller, Elizabeth Torres, K Praveen Karanth, Niklas Wahlberg BMC Evolutionary Biology 2010, 10:172 (10 June 2010) |
|
Research article
Evolution of nectarivory in phyllostomid bats (Phyllostomidae Gray, 1825, Chiroptera: Mammalia) Thomas Datzmann, Otto von Helversen, Frieder Mayer BMC Evolutionary Biology 2010, 10:165 (4 June 2010) |
|
Research article
Ron Rotkopf, Zvika Abramsky, Ofer Ovadia BMC Ecology 2010, 10:15 (2 June 2010) |
|
Research article
Pei-Chun Liao, Dai-Chang Kuo, Chia-Chia Lin, Kuo-Chieh Ho, Tsan-Piao Lin, Shih-Ying Hwang BMC Evolutionary Biology 2010, 10:124 (30 April 2010) |
|
Research article
Phylogeographic history of grey wolves in Europe Małgorzata Pilot, Wojciech Branicki, Włodzimierz Jędrzejewski, Jacek Goszczyński, Bogumiła Jędrzejewska, Ihor Dykyy, Maryna Shkvyrya, Elena Tsingarska BMC Evolutionary Biology 2010, 10:104 (21 April 2010) |
|
Research article
Stefano Mona, Giulio Catalano, Martina Lari, Greger Larson, Paolo Boscato, Antonella Casoli, Luca Sineo, Carolina Di Patti, Elena Pecchioli, David Caramelli, Giorgio Bertorelle BMC Evolutionary Biology 2010, 10:83 (26 March 2010) |
|
Research article
Achim Meyer, Christiane Todt, Nina T Mikkelsen, Bernhard Lieb BMC Evolutionary Biology 2010, 10:70 (9 March 2010) |
|
Research article
Surviving historical Patagonian landscapes and climate: molecular insights from Galaxias maculatus Tyler S Zemlak, Evelyn M Habit, Sandra J Walde, Cecilia Carrea, Daniel E Ruzzante BMC Evolutionary Biology 2010, 10:67 (8 March 2010) |
|
Case Report
Christel Kamp, Timo Wolf, Ignacio G Bravo, Benjamin Kraus, Birgit Krause, Britta Neumann, Gudrun Winskowsky, Alexander Thielen, Albrecht Werner, Barbara S Schnierle Virology Journal 2010, 7:55 (8 March 2010) |
|
Research article
Old divergences in a boreal bird supports long-term survival through the Ice Ages Takema Saitoh, Per Alström, Isao Nishiumi, Yoshimitsu Shigeta, Dawn Williams, Urban Olsson, Keisuke Ueda BMC Evolutionary Biology 2010, 10:35 (4 February 2010) |
|
Research article
Evolution of trappin genes in mammals Akira Kato, Alejandro P Rooney, Yutaka Furutani, Shigehisa Hirose BMC Evolutionary Biology 2010, 10:31 (29 January 2010) |
|
Research article
Ancient origin of a Western Mediterranean radiation of subterranean beetles Ignacio Ribera, Javier Fresneda, Ruxandra Bucur, Ana Izquierdo, Alfried P Vogler, Jose M Salgado, Alexandra Cieslak BMC Evolutionary Biology 2010, 10:29 (28 January 2010) Western Mediterranean Leptodirini originated in the Early–Mid Oligocene and adapted to living in caves in the main areas where they are found today by the Late Oligocene, while diversification has occurred since the Early Miocene.
|
|
Research article
Annie Guiller, Luc Madec BMC Evolutionary Biology 2010, 10:18 (20 January 2010) |
|
Software
TreeGraph 2: Combining and visualizing evidence from different phylogenetic analyses Ben C Stöver, Kai F Müller BMC Bioinformatics 2010, 11:7 (5 January 2010) |
|
Research article
Sebastian Steinfartz, Scott Glaberman, Deborah Lanterbecq, Michael A Russello, Sabrina Rosa, Torrance C Hanley, Cruz Marquez, Howard L Snell, Heidi M Snell, Gabriele Gentile, Giacomo Dell'Olmo, Alessandro M Powell, Adalgisa Caccone BMC Evolutionary Biology 2009, 9:297 (22 December 2009) |
|
Research article
Martin Irestedt, Jon Fjeldså, Love Dalén, Per GP Ericson BMC Evolutionary Biology 2009, 9:268 (21 November 2009) |
|
Research article
A remarkable diversity of bone-eating worms (Osedax; Siboglinidae; Annelida) Robert C Vrijenhoek, Shannon B Johnson, Greg W Rouse BMC Biology 2009, 7:74 (10 November 2009) This article is part of a collection on Open Access Biodiversity... Twelve additional evolutionary lineages of Osedax worms significantly expand the known diversity of this genus of mouthless marine bone-eaters, and date the split from their siboglinid relatives to between 20 and 45 million years ago.
|
|
Research
Erica Spackman, David E Swayne, Martin Gilbert, Damien O Joly, William B Karesh, David L Suarez, Ruuragchaa Sodnomdarjaa, Purevtseren Dulam, Carol Cardona Virology Journal 2009, 6:190 (5 November 2009) |
|
Research article
Phylogenetic analysis of mitochondrial substitution rate variation in the angiosperm tribe Sileneae Daniel B Sloan, Bengt Oxelman, Anja Rautenberg, Douglas R Taylor BMC Evolutionary Biology 2009, 9:260 (31 October 2009) |
|
Research article
Estimating the phylogeny and divergence times of primates using a supermatrix approach Helen J Chatterjee, Simon YW Ho, Ian Barnes, Colin Groves BMC Evolutionary Biology 2009, 9:259 (27 October 2009) |
|
Research
David M Sintasath, Nathan D Wolfe, Hao Zheng, Matthew LeBreton, Martine Peeters, Ubald Tamoufe, Cyrille F Djoko, Joseph LD Diffo, Eitel Mpoudi-Ngole, Walid Heneine, William M Switzer Retrovirology 2009, 6:97 (27 October 2009) |
|
Research article
Michael E Alfaro, Chad D Brock, Barbara L Banbury, Peter C Wainwright BMC Evolutionary Biology 2009, 9:255 (22 October 2009) |
|
Research article
Xing Fan, Li-Na Sha, Rui-Wu Yang, Hai-Qin Zhang, Hou-Yang Kang, Cun-Bang Ding, Li Zhang, You-Liang Zheng, Yong-Hong Zhou BMC Evolutionary Biology 2009, 9:247 (8 October 2009) |
|
Research
Genetic diversity and evolution of human metapneumovirus fusion protein over twenty years Chin-Fen Yang, Chiaoyin K Wang, Sharon J Tollefson, Rohith Piyaratna, Linda D Lintao, Marla Chu, Alexis Liem, Mary Mark, Richard R Spaete, James E Crowe, John V Williams Virology Journal 2009, 6:138 (9 September 2009) |
|
Research article
Rodolfo Pérez-Rodríguez, Omar Domínguez-Domínguez, Gerardo de León, Ignacio Doadrio BMC Evolutionary Biology 2009, 9:223 (7 September 2009) |
|
Research article
Quaternary history and contemporary patterns in a currently expanding species Carole Kerdelhué, Lorenzo Zane, Mauro Simonato, Paola Salvato, Jérôme Rousselet, Alain Roques, Andrea Battisti BMC Evolutionary Biology 2009, 9:220 (4 September 2009) |
|
Research article
Francesco Santini, Luke J Harmon, Giorgio Carnevale, Michael E Alfaro BMC Evolutionary Biology 2009, 9:194 (8 August 2009) |
|
Research article
The root of the East African cichlid radiations Julia Schwarzer, Bernhard Misof, Diethard Tautz, Ulrich K Schliewen BMC Evolutionary Biology 2009, 9:186 (5 August 2009) |
|
Research
Experimental evidence indicating that mastreviruses probably did not co-diverge with their hosts Gordon W Harkins, Wayne Delport, Siobain Duffy, Natasha Wood, Adérito L Monjane, Betty E Owor, Lara Donaldson, Salem Saumtally, Guy Triton, Rob W Briddon, Dionne N Shepherd, Edward P Rybicki, Darren P Martin, Arvind Varsani Virology Journal 2009, 6:104 (16 July 2009) |
|
Research article
Rooting human parechovirus evolution in time Nuno R Faria, Michel de Vries, Formijn J van Hemert, Kimberley Benschop, Lia van der Hoek BMC Evolutionary Biology 2009, 9:164 (15 July 2009) |
|
Research
William C Black, Jeffrey B Doty, Mark T Hughes, Barry J Beaty, Charles H Calisher Virology Journal 2009, 6:102 (14 July 2009) |
|
Research article
MHC-linked and un-linked class I genes in the wallaby Hannah V Siddle, Janine E Deakin, Penny Coggill, Elizabeth Hart, Yuanyuan Cheng, Emily SW Wong, Jennifer Harrow, Stephan Beck, Katherine Belov BMC Genomics 2009, 10:310 (14 July 2009) |
|
Research article
Christy A Hipsley, Lin Himmelmann, Dirk Metzler, Johannes Müller BMC Evolutionary Biology 2009, 9:151 (1 July 2009) |
|
Research article
Gang Song, Yanhua Qu, Zuohua Yin, Shouhsien Li, Naifa Liu, Fumin Lei BMC Evolutionary Biology 2009, 9:143 (27 June 2009) |
|
Research article
Ines Van Bocxlaer, SD Biju, Simon P Loader, Franky Bossuyt BMC Evolutionary Biology 2009, 9:131 (11 June 2009) The true toads (Bufonidae) of India belong to a clade nesting within New World Bufonidae, indicating a single invasion event, with endemic diversity arising in the rainforests of Western Ghats and Sri Lanka.
|
|
Research article
Species delimitation and phylogeny of a New Zealand plant species radiation Heidi M Meudt, Peter J Lockhart, David Bryant BMC Evolutionary Biology 2009, 9:111 (20 May 2009) |
|
Research article
Emiliano Trucchi, Valerio Sbordoni BMC Evolutionary Biology 2009, 9:109 (18 May 2009) |
|
Research article
Eske Willerslev, M Thomas P Gilbert, Jonas Binladen, Simon YW Ho, Paula F Campos, Aakrosh Ratan, Lynn P Tomsho, Rute R da Fonseca, Andrei Sher, Tatanya V Kuznetsova, Malgosia Nowak-Kemp, Terri L Roth, Webb Miller, Stephan C Schuster BMC Evolutionary Biology 2009, 9:95 (11 May 2009) |
|
Research article
Niklas Wahlberg, Elisabet Weingartner, Andrew D Warren, Sören Nylin BMC Evolutionary Biology 2009, 9:92 (7 May 2009) |
|
Research article
Mitochondrial phylogeography of baboons (Papio spp.) – Indication for introgressive hybridization? Dietmar Zinner, Linn F Groeneveld, Christina Keller, Christian Roos BMC Evolutionary Biology 2009, 9:83 (23 April 2009) |
|
Research
Close phylogenetic relationship between Angolan and Romanian HIV-1 subtype F1 isolates Monick L Guimarães, Ana Vicente, Koko Otsuki, Rosa da Silva, Moises Francisco, Filomena da Silva, Ducelina Serrano, Mariza G Morgado, Gonzalo Bello Retrovirology 2009, 6:39 (22 April 2009) |
|
Research article
David S Hibbett, P Brandon Matheny BMC Biology 2009, 7:13 (10 March 2009) The ancestor of Agaricomycete fungi that form ectomycorrhizal symbioses with woody plants was free living before forming several independent associations with gymnosperms as it is of more ancient origin than any of its potential hosts.
|
|
Correspondence
A framework for evolutionary systems biology Laurence Loewe BMC Systems Biology 2009, 3:27 (24 February 2009) |
|
Research article
Roberto V Vilela, Taís Machado, Karen Ventura, Valéria Fagundes, Maria de J Silva, Yatiyo Yonenaga-Yassuda BMC Evolutionary Biology 2009, 9:29 (3 February 2009) |
|
Research
William M Switzer, Marco Salemi, Shoukat H Qari, Hongwei Jia, Rebecca R Gray, Aris Katzourakis, Susan J Marriott, Kendle N Pryor, Nathan D Wolfe, Donald S Burke, Thomas M Folks, Walid Heneine Retrovirology 2009, 6:9 (2 February 2009) |
|
Research article
Seven new dolphin mitochondrial genomes and a time-calibrated phylogeny of whales Ye Xiong, Matthew C Brandley, Shixia Xu, Kaiya Zhou, Guang Yang BMC Evolutionary Biology 2009, 9:20 (25 January 2009) |
|
Research
Florian Leese, Anna Kop, Johann-Wolfgang Wägele, Christoph Held Frontiers in Zoology 2008, 5:19 (19 December 2008) |
|
Research article
Divergence and diversification in North American Psoraleeae (Fabaceae) due to climate change Ashley N Egan, Keith A Crandall BMC Biology 2008, 6:55 (17 December 2008) Glaciation-driven climate oscillations 1-2 million years ago strongly influenced the diversification of the North American Psoreleeae legumes, showing how global climate change can shape biodiversity.
|
|
Research article
Molecular phylogenetics reveal multiple tertiary vicariance origins of the African rain forest trees Thomas LP Couvreur, Lars W Chatrou, Marc SM Sosef, James E Richardson BMC Biology 2008, 6:54 (16 December 2008) Custard apple species endemic to East Africa arose during three successive dry periods that separated the West-Central and East African rainforests, giving insights into the origins of biodiversity in these important threatened ecosystems.
|
|
Research article
Alejandro Zaldívar-Riverón, Mark R Shaw, Alberto G Sáez, Miharu Mori, Sergey A Belokoblylskij, Scott R Shaw, Donald LJ Quicke BMC Evolutionary Biology 2008, 8:329 (4 December 2008) |
|
Methodology article
Fully Bayesian tests of neutrality using genealogical summary statistics Alexei J Drummond, Marc A Suchard BMC Genetics 2008, 9:68 (31 October 2008) |
|
Research article
Conflicting phylogenetic signals in the SlX1/Y1 gene in Silene Anja Rautenberg, Dmitry Filatov, Bodil Svennblad, Nahid Heidari, Bengt Oxelman BMC Evolutionary Biology 2008, 8:299 (30 October 2008) |
|
Methodology article
Bayesian inference of population size history from multiple loci Joseph Heled, Alexei J Drummond BMC Evolutionary Biology 2008, 8:289 (23 October 2008) |
|
Research article
Accelerated evolutionary rates in tropical and oceanic parmelioid lichens (Ascomycota) H Thorsten Lumbsch, Andrew L Hipp, Pradeep K Divakar, Oscar Blanco, Ana Crespo BMC Evolutionary Biology 2008, 8:257 (22 September 2008) |
|
Research article
Satish Kumar, PBSV Padmanabham, Rajasekhara R Ravuri, Kiran Uttaravalli, Padmaja Koneru, P Aditi Mukherjee, B Das, M Kotal, D Xaviour, SY Saheb, VR Rao BMC Evolutionary Biology 2008, 8:230 (11 August 2008) |
|
Research article
Johannes Krause, Tina Unger, Aline Noçon, Anna-Sapfo Malaspinas, Sergios-Orestis Kolokotronis, Mathias Stiller, Leopoldo Soibelzon, Helen Spriggs, Paul H Dear, Adrian W Briggs, Sarah CE Bray, Stephen J O'Brien, Gernot Rabeder, Paul Matheus, Alan Cooper, Montgomery Slatkin, Svante Pääbo, Michael Hofreiter BMC Evolutionary Biology 2008, 8:220 (28 July 2008) |
|
Research article
Diversification of myco-heterotrophic angiosperms: Evidence from Burmanniaceae Vincent Merckx, Lars W Chatrou, Benny Lemaire, Moses N Sainge, Suzy Huysmans, Erik F Smets BMC Evolutionary Biology 2008, 8:178 (23 June 2008) The Burmanniaceae, a family of angiosperms that have symbiotic relationships with fungi, originated in the late-Cretaceous period in West Gondwana and experienced major diversification in the Eocene when tropical rain forest expanded dramatically.
|
|
Research article
Matthias Stöck, Alessandra Sicilia, Natalia M Belfiore, David Buckley, Sabrina Lo Brutto, Mario Lo Valvo, Marco Arculeo BMC Evolutionary Biology 2008, 8:56 (23 February 2008) |
|
Research article
Strong mitochondrial DNA support for a Cretaceous origin of modern avian lineages Joseph W Brown, Joshua S Rest, Jaime García-Moreno, Michael D Sorenson, David P Mindell BMC Biology 2008, 6:6 (28 January 2008) The evolutionary origin of modern birds, as determined using mitochondrial DNA data, is still estimated to be more ancient than the fossil evidence suggests, even after correcting for potential pitfalls of molecular dating methods.
|