|
Over- and under-represented GO categories among genes retained after the P. patens genome duplication |
||||
| GO category/KO pathway |
description |
No. of annotated genes in the peak |
No. of annotated genes in the reference set |
fdr corrected p-value |
|
|
||||
| enriched |
||||
| GO:0006091 |
generation of precursor metabolites and energy |
80 |
35 |
0.0029 |
| GO:0009058 |
biosynthesis |
119 |
67 |
0.0109 |
| reduced |
||||
| GO:0006412 |
protein biosynthesis |
54 |
82 |
0.0424 |
| GO:0006996 |
organelle organization and biogenesis |
28 |
67 |
0.0005 |
| GO:0007010 |
cytoskeleton organization and biogenesis |
3 |
19 |
0.0059 |
| GO:0007028 |
cytoplasm organization and biogenesis |
27 |
62 |
0.0010 |
Rensing et al. BMC Evolutionary Biology 2007 7:130 doi:10.1186/1471-2148-7-130 |
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