Table 1 |
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|
List of species used in this study, with DDBJ/EMBL/GenBank Accession Numbers. Classifications follow Nelson [23]. |
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|
Order |
Family |
Species |
Accession No. |
|
|
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|
Outgroups |
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|
Polymixiiformes |
Polymixiidae |
Polymixia japonica |
[DDBJ: AB034826] |
|
Beryciformes |
Berycidae |
Beryx splendens |
[DDBJ: AP002939] |
|
Percomorpha sensu Miya et al. [18] |
|||
|
Ophidiiformes |
Ophidiidae |
Bassozetus zenkevitchi |
[DDBJ: AP004405] |
|
Bythitidae |
Diplacanthopoma brachysoma |
[DDBJ: AP004408] |
|
|
Lophiiformes |
Lophiidae |
Lophius americanus |
[DDBJ: AP004414] |
|
Lophius litulon |
[DDBJ: AP004413] |
||
|
Chaunacidae |
Chaunax abei |
[DDBJ: AP004415] |
|
|
Chaunax tosaensis |
[DDBJ: AP004416] |
||
|
Caulophrynidae |
Caulophryne pelagica |
[DDBJ: AP004417] |
|
|
Melanocetidae |
Melanocetus murrayi |
[DDBJ: AP004418] |
|
|
Mugiliformes |
Mugilidae |
Mugil cephalus |
[DDBJ: AP002930] |
|
Crenimugil crenilabis |
[DDBJ: AP002931] |
||
|
Atheriniformes |
Melanotaeniidae |
Melanotaenia lacustris |
[DDBJ: AP004419] |
|
Atherinidae |
Hypoatherina tsurugae |
[DDBJ: AP004420] |
|
|
Beloniformes |
Adrianichthyidae |
Oryzias latipes |
[DDBJ: AP004421] |
|
Scomberesocidae |
Cololabis saira |
[DDBJ: AP002932] |
|
|
Exocoetidae |
Exocoetus volitans |
[DDBJ: AP002933] |
|
|
Cyprinodontiformes |
Aplocheilidae |
Kryptolebias marmoratus |
[GenBank: AF283503] |
|
Poeciliidae |
Gambusia affinis |
[DDBJ: AP004422] |
|
|
Zeiformes |
Caproidae |
Antigonia capros |
[DDBJ: AP002943] |
|
Gasterosteiformes |
Hypoptychidae |
Hypoptychus dybowskii |
[DDBJ: AP004437] |
|
Gasterosteidae |
Gasterosteus aculeatus |
[DDBJ: AP002944] |
|
|
Indostomidae |
Indostomus paradoxus |
[DDBJ: AP004438] |
|
|
Synbranchiformes |
Synbranchidae |
Monopterus albus |
[DDBJ: AP002945] |
|
Mastacembelidae |
Mastacembelus favus |
[DDBJ: AP002946] |
|
|
Scorpaeniformes |
Dactylopteridae |
Dactyloptena tiltoni |
[DDBJ: AP004440] |
|
Dactyloptena peterseni |
[DDBJ: AP002947] |
||
|
Scorpaenidae |
Helicolenus hilgendorfi |
[DDBJ: AP002948] |
|
|
Sebastes schlegeli |
[GenBank: AY491978] |
||
|
Triglidae |
Satyrichthys amiscus |
[DDBJ: AP004441] |
|
|
Cottidae |
Cottus reinii |
[DDBJ: AP004442] |
|
|
Cyclopteridae |
Aptocyclus ventricosus |
[DDBJ: AP004443] |
|
|
Perciformes |
Pseudochromidae |
Labracinus cyclophthalma |
[DDBJ: AP009125] |
|
Percidae |
Etheostoma radiosum |
[GenBank: AY341348] |
|
|
Carangidae |
Carangoides armatus |
[DDBJ: AP004444] |
|
|
Caranx melampygus |
[DDBJ: AP004445] |
||
|
Trachurus japonicus |
[DDBJ: AP003091] |
||
|
Trachurus trachurus |
[DDBJ: AB108498] |
||
|
Emmelichthyidae |
Emmelichthys struhsakeri |
[DDBJ: AP004446] |
|
|
Lutjanidae |
Pterocaesio tile |
[DDBJ: AP004447] |
|
|
Sparidae |
Pagrus auriga |
[DDBJ: AB124801] |
|
|
Pagrus major |
[DDBJ: AP002949] |
||
|
Cichlidae |
Oreochromis sp. |
[DDBJ: AP009126] |
|
|
Neolamprologus brichardi |
[DDBJ: AP006014] |
||
|
Tropheus duboisi |
[DDBJ: AP006015] |
||
|
Astronotus ocellatus |
[DDBJ: AP009127] |
||
|
Embiotocidae |
Cymatogaster aggregata |
[DDBJ: AP009128] |
|
|
Ditrema temmincki |
[DDBJ: AP009129] |
||
|
Pomacentridae |
Abudefduf vaigiensis |
[DDBJ: AP006016] |
|
|
Amphiprion ocellaris |
[DDBJ: AP006017] |
||
|
Labridae |
Pseudolabrus sieboldi |
[DDBJ: AP006019] |
|
|
Halichoeres melanurus |
[DDBJ: AP006018] |
||
|
Odacidae |
Odax cyanomelas |
[DDBJ: AP009130] |
|
|
Scaridae |
Chlorurus sordidus |
[DDBJ: AP006567] |
|
|
Zoarcidae |
Lycodes toyamensis |
[DDBJ: AP004448] |
|
|
Pholidae |
Enedrias crassispina |
[DDBJ: AP004449] |
|
|
Trichodontidae |
Arctoscopus japonicus |
[DDBJ: AP003090] |
|
|
Blennidae |
Petroscirtes breviceps |
[DDBJ: AP004450] |
|
|
Salarias fasciatus |
[DDBJ: AP004451] |
||
|
Gobiesocidae |
Arcos sp. |
[DDBJ: AP004452] |
|
|
Aspasma minima |
[DDBJ: AP004453] |
||
|
Rhyacichthyidae |
Rhyacichthys aspro |
[DDBJ: AP004454] |
|
|
Eleotridae |
Eleotris acanthopoma |
[DDBJ: AP004455] |
|
|
Gobiidae |
Acanthogobius hasta |
[GenBank: AY486321] |
|
|
Scombridae |
Auxis rochei |
[DDBJ: AB103467] |
|
|
Auxis thazard |
[DDBJ: AB105447] |
||
|
Euthynnus alletteratus |
[DDBJ: AB099716] |
||
|
Katsuwonus pelamis |
[DDBJ: AB101290] |
||
|
Scomber scombrus |
[DDBJ: AB120717] |
||
|
Thunnus alalunga |
[DDBJ: AB101291] |
||
|
Thunnus thynnus thynnus |
[GenBank: AY302574] |
||
|
Pleuronectiformes |
Paralicthyidae |
Paralichthys olivaceus |
[DDBJ: AB028664] |
|
Pleuronectidae |
Platichthys bicoloratus |
[DDBJ: AP002951] |
|
|
Tetraodontiformes |
Balistidae |
Sufflamen fraenatus |
[DDBJ: AP004456] |
|
Monacanthidae |
Stephanolepis cirrhifer |
[DDBJ: AP002952] |
|
|
Tetraodontidae |
Takifugu rubripes |
[EMBL: AJ421455] |
|
|
Molidae |
Masturus lanceolatus |
[DDBJ: AP006239] |
|
|
Mola mola |
[DDBJ: AP006238] |
||
|
|
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|
Mabuchi et al. BMC Evolutionary Biology 2007 7:10 doi:10.1186/1471-2148-7-10 |
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