Tracking the connection between evolutionary and functional shifts using the fungal lipase/feruloyl esterase A family

doi:10.1186/1471-2148-6-92

BMC Evolutionary Biology

Volume 6

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Levasseur A
Gouret P
Lesage-Meessen L
Asther M
Asther M
Record E
Pontarotti P

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Levasseur A
Gouret P
Lesage-Meessen L
Asther M
Asther M
Record E
Pontarotti P
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Research article

Tracking the connection between evolutionary and functional shifts using the fungal lipase/feruloyl esterase A family

Anthony Levasseur¹^,2 , Philippe Gouret¹ , Laurence Lesage-Meessen² , Michèle Asther² , Marcel Asther² , Eric Record² and Pierre Pontarotti¹

¹Phylogenomics Laboratory. EA 3781 Evolution Biologique Université de Provence, Case 19, Pl. V. Hugo, 13331 Marseille Cedex 03, France

²UMR 1163 INRA de Biotechnologie des Champignons Filamenteux, IFR86-BAIM, Universités de Provence et de la Méditerranée, ESIL, 163 avenue de Luminy, Case Postale 925, 13288 Marseille Cedex 09, France

author email corresponding author email

BMC Evolutionary Biology 2006, 6:92doi:10.1186/1471-2148-6-92


Published:	8 November 2006

Additional files

Additional file 1:

Table S1. Parameter estimates for the lipase/feruloyl esterase data under Model B and the effects of codon usage bias on LRTs (n = 29).

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Additional file 2:

Table S2. Positively selected sites identified by Bayes empirical Bayes analysis using the Fcodon and Fequal models (n = 29).

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Additional file 3:

Detection of positive selection along different branches in the gene phylogeny. All tests were performed as described for branch b.

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