BMC Evolutionary Biology

official impact factor 3.70

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Global similarity and local divergence in human and mouse gene co-expression networks

Panayiotis Tsaparas, Leonardo Mariño-Ramírez, Olivier Bodenreider, Eugene V Koonin* and I King Jordan

BMC Evolutionary Biology 2006, 6:70 doi:10.1186/1471-2148-6-70

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BioMed Central: 5 citations

Proceedings   Open Access

Systematic identification of functional modules and cis-regulatory elements in Arabidopsis thaliana

Jianhua Ruan, Joseph Perez, Brian Hernandez, Chengwei Lei, Garry Sunter, Valerie M Sponsel BMC Bioinformatics 2011, 12(Suppl 12):S2 (24 November 2011)

Methodology article   Open Access Highly Accessed

A general co-expression network-based approach to gene expression analysis: comparison and applications

Jianhua Ruan, Angela K Dean, Weixiong Zhang BMC Systems Biology 2010, 4:8 (2 February 2010)

Research article   Open Access

Natural selection governs local, but not global, evolutionary gene coexpression networks in Caenorhabditis elegans

I King Jordan, Lee S Katz, Dee R Denver, J Todd Streelman BMC Systems Biology 2008, 2:96 (13 November 2008)

Method   Open Access Highly Accessed

Boolean implication networks derived from large scale, whole genome microarray datasets

Debashis Sahoo, David L Dill, Andrew J Gentles, Robert Tibshirani, Sylvia K Plevritis Genome Biology 2008, 9:R157 (30 October 2008)

A method for analysis of microarray data is presented that extracts statistically significant Boolean implication relationships between pairs of genes.

Research article   Open Access

Employing conservation of co-expression to improve functional inference

Carsten O Daub, Erik LL Sonnhammer BMC Systems Biology 2008, 2:81 (22 September 2008)

The accuracy of predictions of protein interactions may be improved by employing a cross-species strategy, comparing patterns of co-expressed genes from a number of species using popular co-expression distance measures.