Figure 4.

Phylogeny of vertebrate species. Three methods were applied to the RAG1 gene from 46 species. Distance method: alignment with ClustalW, (Kimura 2-parameter distance), reconstruction by NJ algorithm. MP: use of same alignment. PAUP* has been used with default parameters. Signature method: 6-letter words – χ2 metric. The tree is inferred by NJ method. The bootstrap coefficients for distance and signature method are indicated.

Chapus et al. BMC Evolutionary Biology 2005 5:63   doi:10.1186/1471-2148-5-63
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