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Open Access Open Badges Research article

Automatic selection of representative proteins for bacterial phylogeny

Marshall Bern* and David Goldberg

Author Affiliations

Palo Alto Research Center, 3333 Coyote Hill Road, Palo Alto, CA 94304, USA

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BMC Evolutionary Biology 2005, 5:34  doi:10.1186/1471-2148-5-34

Published: 31 May 2005

Additional files

Additional File 1:

(1) a phylogenetic tree computed directly from a distance matrix for 30 diverse bacteria, (2) the representative proteins used in all the phylogenetic tree computations, and (3) some probable horizontal transfers detected by the study.

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