Table 3

Measures of genetic diversity for the North American vaejovid scorpion Pseudouroctonus reddelli, including sample size (n), number of unique haplotypes (h), haplotype diversity (Hd), nucleotide diversity (π), Tajima’sD, Fu’s Fs, sum of squares deviation (SSD), and Harpending’s raggedness index (RI)
mtDNA ITS
Locality n h Hd π D Fs SSD RI n h Hd π D Fs SSD RI
GT 6 3 0.6000 0.0051 −1.3152 3.3578 0.2035 0.4533 12 5 0.7880 0.0032 2.2171 0.4605 0.0336 0.0826
Aus 5 4 0.9000 0.0093 −0.2287 1.7144 0.2151 0.5900 10 6 0.8440 0.0047 −0.2812 −0.1484 0.0468 0.1269
MF 4 2 0.5000 0.0004 −0.6124 0.1719 0.0219 0.2500 8 3 0.7140 0.0012 1.1039 0.2043 0.0087 0.1225
NB 5 4 0.9000 0.0056 0.8036 0.8832 0.2112 0.5900 10 7 0.9330 0.0050 −0.0445 −1.1634 0.0491 0.1437
SA 6 4 0.8670 0.0064 0.2878 1.9308 0.1831 0.4889 12 8 0.9390 0.0039 0.4190 −2.2709 0.0611 0.1607
HC 5 5 1.0000 0.0043 −0.9543 −1.3451 0.0609 0.1200 10 4 0.8220 0.0034 1.4113 1.4153 0.0088 0.0385
MH 5 0.8000 0.0097 −0.4962 4.0693 0.2350 0.5200 10 4 0.7330 0.0024 0.5276 0.5924 0.0711 0.2064
Jun 4 1 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 6 3 0.7330 0.0047 1.6471 2.3987 0.1648 0.2756
CW 4 3 0.8330 0.0035 0.4671 1.1632 0.2223 0.7500 6 4 0.8670 0.0020 1.3861 −0.8336 0.0758 0.2933
All 47 32 0.9800 0.0156 −0.4569 −3.5808 0.0032 0.0109 86 32 0.8860 0.0042 −0.8142 −20.6848 0.0038 0.0120

Values of Fs and Tajima’s D in boldface indicate rejection of the hypothesis of constant population size (P < 0.05). SSD and RI values in boldface indicate failure to reject the hypothesis of recent expansion (P > 0.05). Sampled localities are abbreviated as follows: Georgetown (GT), Austin (Aus), Marble Falls (MF), New Braunfels (NB), San Antonio (SA), Haby Cemetery (HC), Mountain Home (MH), Junction (Jun), and Camp Wood (CW). Sample size for the nuclear internal transcribed spacer region (ITS) represents the number of phased alleles.

Bryson et al.

Bryson et al. BMC Evolutionary Biology 2014 14:9   doi:10.1186/1471-2148-14-9

Open Data