Table 1

Details of the Zonotrichia capensis samples used in this study
Locality (Locality code)a Lat./Long. Sample typeb Sample IDc CR COI ND2 16 s CHD1Z MELK Fib5
NW San Cristóbal, Chiapas, Mexico (1) 16°45’ N, 92°40’ W SS AMNH 766634 KC693420 - - - - - -
Chichicastenango, Quiché, Guatemala (2) 14°56’ N, 91°07’ W SS AMNH 397960 KC693421 - - - - - -
República Dominicana (3) 19°20’ N, 71°43’ W BS RD-ZCA KC693437 - - - - - -
RD-ZCA-2 KC693436 - - - - - -
RD-ZCA-3 KC693439 - - - - - -
RD-ZCA-4 KC693438 - - - - - -
RD-ZCA-5 KC693440 - - - - - -
La Georgina, San José, Costa Rica (4) 9°34’ N, 83°44’ W MLHS LSUMZ B16204 KC693418 KC693338 KC693306 KC693272 KC693466 KC693207 KC693240
LSUMZ B16236 KC693419 KC693339 KC693307 KC693273 KC693467 KC693208 KC693241
Curaçao (5) 12°10' N, 69°00' W SS AMNH 174800 KC693428 - - - - - -
AMNH 174801 KC693429 - - - - - -
El Junquito-Colonia Tovar, Aragua, Venezuela (6) 10°25' N, 67°13’ W MLHS GFB3125 KC693414 KC693346 KC693314 KC693280 KC693474 KC693215 -
GFB3126 KC693415 KC693347 KC693315 KC693281 KC693475 KC693216 KC693248
GFB3129 KC693413 KC693348 KC693316 KC693282 KC693476 KC693217 KC693249
GFB3142 KC693417 KC693349 KC693317 KC693283 KC693477 KC693218 KC693250
GFB3162 KC693416 KC693350 KC693318 KC693284 KC693478 KC693219 -
Laguna de La Herrera, Sabana de Bogotá, Colombia (7) 4°40’ N, 74°16’ W SS AMNH 803019 KC693430 - - - - - -
AMNH 803020 KC693431 - - - - - -
AMNH 803021 KC693432 - - - - - -
Summit Mt. Roraima, Roraima, Venezuela (8) 5°14’ N, 60°47’ W SS AMNH 237128 KC693427 - - - - - -
AMNH 237131 KC693426 - - - - - -
Quito, Pichincha, Ecuador (9) 0°13’ S, 78°30’ W MLHS PH-QUITO-2 KC693444 - - - - - -
PH-QUITO-4 KC693441 - - - - - -
PH-QUITO-6 KC693443 - - - - - -
PH-QUITO-7 KC693442 - - - - - -
Rio Tocantins– Baião, Pará, Brazil (10) 2°50’ S, 49°36’ W SS AMNH 431444 KC693424 - - - - - -
AMNH 431447 KC693425 - - - - - -
Huánuco-La Unión Rd., Huánuco, Perú (11) 9°53’ S, 76°32’ W MLHS LSUMZ B3603 KC693412 - - - - - -
Cushi, Huánuco, Perú (12) 9°55’ S, 75°45’ W MLHS LSUMZ B8084 KC693409 KC693344 KC693312 KC693278 KC693472 KC693213 KC693246
LSUMZ B8131 KC693410 KC693345 KC693313 KC693279 KC693473 KC693214 KC693247
Oxapampa, Pasco, Perú (13) 10°34’ S, 75°24’ W MLHS LSUMZ B1875 KC693411 KC693342 KC693310 KC693276 KC693470 KC693211 KC693244
Garanhuns, Pernambuco, Brazil (14) 8°54’ S, 36°29’ W SS AMNH 245037 KC693422 - - - - - -
AMNH 245038 KC693423 - - - - - -
Chuspipita, La Paz, Bolivia (15) 16°18’ S, 67°47’ W MLHS LSUMZ B1277 KC693408 KC693335 KC693303 KC693269 KC693463 KC693204 KC693237
Catarata Arco Iris, Santa Cruz, Bolivia (16) 13°55’ S, 60°45’ W MLHS LSUMZ B14823 KC693406 KC693336 KC693304 KC693270 KC693464 KC693205 KC693238
LSUMZ B14829 KC693403 KC693337 KC693305 KC693271 KC693465 KC693206 KC693239
Charagua, Santa Cruz, Bolivia (17) 19°48’ S, 61°50’ W MLHS LSUMZ B18743 KC693404 KC693340 KC693308 KC693274 KC693468 KC693209 KC693242
LSUMZ B19108 KC693407 KC693343 KC693311 KC693277 KC693471 KC693212 KC693245
LSUMZ B18745 KC693405 KC693341 KC693309 KC693275 KC693469 KC693210 KC693243
LSUMZ B18751 KC693402 - - - - - -
Yavi, Jujuy, Argentina (18) 22°8’ S, 65°28’ W BS SCL055 KC693359 - - - - - -
SCL056 KC693360 - - - - - -
SCL060 KC693361 - - - - - -
SCL062 KC693362 - - - - - -
SCL063 KC693363 KC693322 KC693288 KC693254 KC693448 KC693189 KC693223
SCL066 KC693364 - - - - - -
Tres Cruces, Jujuy, Argentina (19) 22°55’ S, 65°35’ W BS SCL071 KC693365 - - - - - -
SCL072 KC693366 - - - - - -
SCL074 KC693367 - - - - - -
Iguazú, Misiones, Argentina (20) 25°34’ S, 54°34’ W BS SCL505 KC693396 - - - - - -
Tafí del Valle, Tucumán, Argentina (21) 26°52’ S, 65°41’ W BS SCL084 KC693368 - KC693289 KC693255 KC693449 KC693190 KC693224
SCL085 KC693369 - - - - - -
SCL086 KC693370 - - - - - -
SCL088 KC693371 KC693323 KC693290 KC693256 KC693450 KC693191 KC693225
Rd. 42 30 k. SE of El Peñon, Catamarca, Argentina (22) 26°4’ S, 67°11’ W MLHS SCL009 KC693372 - - - - - -
Quimilí, Santiago del Estero, Argentina (23) 27°38’ S, 62°25’ W BS SCL037 KC693353 - - - - - -
SCL038 KC693354 KC693321 KC693287 KC693253 KC693447 KC693188 KC693222
SCL044 KC693355 - - - - - -
SCL048 KC693356 - - - - - -
SCL051 KC693357 - - - - - -
SCL052 KC693358 - - - - - -
Reserva Natural del Iberá, Corrientes, Argentina (24) 28°06’ S, 57°06’ W BS SCL507 KC693397 KC693334 KC693302 KC693268 KC693462 KC693203 KC693236
SCL508 KC693398 - - - - - -
Mendoza, Mendoza, Argentina (25) 32°53’ S, 68°49’ W BS SCL502 KC693399 KC693332 KC693300 KC693266 KC693460 KC693201 -
SCL503 KC693400 KC693333 KC693301 KC693267 KC693461 KC693202 KC693235
SCL504 KC693401 - - - - - -
La Reja, Buenos Aires, Argentina (26) 34°40 S’, 58°50’ W BS SCL010 KC693390 - - - - - -
Magdalena, Buenos Aires, Argentina (27) 35°04’ S, 57°32’ W BS SCL110 KC693391 KC693328 KC693296 KC693262 KC693456 KC693197 KC693231
SCL111 KC693392 - - - - - -
SCL112 KC693393 KC693329 KC693297 KC693263 KC693457 KC693198 KC693232
SCL113 KC693394 KC693330 KC693298 KC693264 KC693458 KC693199 KC693233
SCL115 KC693395 KC693331 KC693299 KC693265 KC693459 KC693200 KC693234
Isla de Mocha, Arauco, Chile (28) 38°23’ S, 73°52’ W SS AMNH 387432 KC693433 - - - - - -
Puerto Montt, Llanquihue, Chile (29) 41°28’ S, 72°56’ W SS AMNH 182548 KC693435 - - - - - -
Golfo de Ancud, Palena, Chile (30) 43°37’ S, 71°48’ W SS AMNH 182547 KC693434 - - - - - -
Trelew, Chubut, Argentina (31) 43°15’ S, 65°18’ W BS SCL089 KC693373 - - - - - -
SCL090 KC693374 - - - - - -
SCL091 KC693375 - - - - - -
SCL092 KC693376 - - - - - -
SCL093 KC693377 - - - - - -
Güer Aike, Santa Cruz, Argentina (32) 51°39’ S, 69°35’ W BS SCL096 KC693378 KC693324 KC693291 KC693257 KC693451 KC693192 KC693226
SCL097 KC693379 - - - - - -
SCL098 KC693380 - - - - - -
SCL099 KC693381 - - - - - -
SCL100 KC693382 - - - - - -
SCL101 KC693383 - - - - - -
SCL102 KC693384 - - - - - -
Ushuaia, Tierra del Fuego, Argentina (33) 54°48’ S, 68°18’ W BS SCL103 KC693385 - - - - - -
SCL104 KC693386 KC693325 KC693292 KC693258 KC693452 KC693193 KC693227
SCL105 - - KC693293 KC693259 KC693453 KC693194 KC693228
SCL106 KC693387 KC693326 KC693294 KC693260 KC693454 KC693195 KC693229
SCL107 KC693388 KC693327 KC693295 KC693261 KC693455 KC693196 KC693230
SCL108 KC693389 - - - - - -

Localities from which Zonotrichia capensis individuals were sampled; genes amplified for each sample are indicated together with their GenBank accession numbers.

aZonotrichia albicollis and Zonotrichia querula individuals obtained from Kingston, Ontario, Canada and Churchill, Manitoba, Canada, respectively were used as outgroups. GenBank accession Numbers: KC693445; KC693351; KC693319; KC693285; KC693479; KC693220; KC693251; KC693446; KC693352; KC693320; KC693286; KC693221; KC693252.

bMLHS, pectoral muscle, liver or heart sample; BS, blood sample; SS, museum study skin.

cAMNH, American Museum of Natural History; LSUMZ, Louisiana State University Museum of Zoology.

Lougheed et al.

Lougheed et al. BMC Evolutionary Biology 2013 13:58   doi:10.1186/1471-2148-13-58

Open Data