Table 1

Rodent sister-clades with significant (P < 0.05) and marginal (0.05 < P < 0.10) shifts in diversification rate using Δ1shift statistics
Clade Δ1 P-value
CTENOHYSTRICA
(1) Bathyergidae: Heliophobius / Bathyergus,CryptomysClade 1.99 0.09
(2) Caviomorpha: Dasyproctidae / Caviidae 2.04 0.06
(3) Octodontoidea: Base of Octodontidae+Ctenomyidae / Echimyidae 2.40 0.05
(4) Echimyidae : Base Proechimys 2.75 0.05
(5) Ctenomyidae: Ctenomys leucodon/ Sister clade 3.46 0.01
(6) Ctenomyidae: Ctenomys maulinusclade / Sister clade 2.23 0.06
(7) Ctenomyidae: Ctenomys mendocinus / Sister clade 2.54 0.06
SCIUROIDEA
(8) Sciuridae: Aplodontidae / Sciuridae 2.25 0.05
(9) Sciuridae: Sciurillus / other Sciuridae 5.36 0.01
(10) Sciuridae: Flying squirrel clade (Pteromyini tribe) 2.82 0.01
(11)Sciuridae: Nannosciurus / Sister clade 3.28 0.02
(12) Sciuridae: Dremomys clade / Callosciurus clade 3.28 0.03
(13) Sciuridae:Paraxerus clade / (Tamias, Spermophilus) clade 1.73 0.08
(14) Sciuridae: Protoxerus clade / Funisciurusclade 1.96 0.07
(15) Sciuridae: Tamias sibiricus / Sister clade 1.54 0.10
(16) Sciuridae: Spermophilus francklini / Sister clade 2.17 0.05
CASTORIMORPHA
(17) Geomyidae: Castoridae / Geomyioidea clade 2.17 0.05
(18) Geomyidae: Zyzogeomys / Orthogeomys clade 3.04 0.01
(19) Geomyidae: Chaetodipius fallax / Chaetodipius penicillatusclade 2.27 0.07
MYOMORPHA
(20) Anomaluromorpha / Myomorpha 1.81 0.07
(21) Typhlomys / other Muroidea 3.18 0.02
(22) Spalacidae / Eumuroidea 3.18 0.02
(23) Calomyscus / other Muroidea 1.97 0.06
(24) Nesomyidae / other Muroidea 1.97 0.06
(25) Cricetidae / Muridae 2.18 0.05
(26) Murinae: Batomys division / other Murinae 3.42 0.05
(27) Murinae : Micromys / rest ofRattusclade 4.08 0.01
(28) Murinae : Chiropodomys / Sahul + Philippine murine sister-clade 2.27 0.07
(29) Murinae :Vandeularia / Sister clade 4.03 0.01
(30) Murinae : Golunda / Sister clade 3.03 0.02
(31) Deomyinae / Gerbillinae 4.69 0.01
(32) Gerbillinae: Taterillus clade / Gerbillus,Meriones clade 1.66 0.09
(33) Gerbillinae: Gerbillusclade 3.38 0.02
(34) Deomyinae : Deomys / Acomys,Lophuromys clade 3.65 0.01
(35) Arvicolinae : Arvicolinae without Prometheomys 4.29 0.01
(36) Arvicolinae : Dicrostonyx clade / Microtusclade 2.07 0.05
(37) Arvicolinae : Microtus xanthognathus / Sister clade 2.23 0.06
(38) Neotominae : Ochrotomys / Sister clade 2.26 0.05
(39) Neotominae :Baiomys/Scotinomys clade / Sister clade 2.26 0.05
(40) Neotominae : Peromyscus crinitusclade / Sister clade 2.17 0.05
(41) Sigmodontinae : Sigmodontini tribe / Oryzomyala 1.55 0.10
(42) Sigmodontinae : Oxymycterus clade / Akodonclade 1.98 0.08
(43) Sigmodontinae : Akodon cursor clade / Akodon lutescensclade 2.61 0.03
(44) Sigmodontinae : Aepeomys / Sister clade 2.41 0.04
(45) Sigmodontinae : Thomasomysclade 3.05 0.03
(46) Sigmodontinae : Eremoryzomys polius / Sister clade 2.29 0.05
(47) Sigmodontinae : Cerradomysclade / Sister clade 2.29 0.05
(48) Sigmodontinae : Sooretamys angouya / Sister clade 2.56 0.05
(49) Sigmodontinae : Phyllotini and some Akodontini taxa / Oryzomyini tribe sensu lato 1.93 0.06
(50) Sigmodontinae Wiedomys / Sister clade 2.64 0.04
(51) Sigmodontinae : Andinomys / Sister clade 3.44 0.02
(52) Sigmodontinae : Calomys clade / Phyllotis clade 3.45 0.02

Clades can be found in the Additional file 2: Figure S2, Additional file 3: Figure S3, Additional file 4: Figure S4, Additional file 5: Figure S5, Additional file 6: Figure S6, Additional file 7: Figure S7, Additional file 8: Figure S8, Additional file 9: Figure S9, Additional file 10: Figure S10, Additional file 11: Figure S11, Additional file 12: Figure S12, and Additional file 13: Figure S13. Δ1represents the delta shift-statistics of [7] and [73].

Relationships significant at P = 0.05 are shown in bold. Clades in bold are the most diversified ones.

Fabre et al.

Fabre et al. BMC Evolutionary Biology 2012 12:88   doi:10.1186/1471-2148-12-88

Open Data