Additional file 2.
Figure S2. Cladogram depicting the highest-likelihood topology for the Ctenohystrica. Circles at nodes represent bootstrap support (circles: black 100-95%, white 95-70%, gray 70-50%). Maximum likekihood tree (lnL=-714749.2). Displayed clade are highlighted using the simplified full ML topology on the left side of the figure. Molecular marker sampling is depicted for each taxa to the right of the tree. Names of the genes are given. Genes sampled for our dataset (Table 2) are marked in black square while missing genes are symbolized by white squares. Triangles indicate significant (P < 0.05) and marginal (0.05 < P < 0.1) shifts in diversification rate (SDR) as inferred by Δ1. LA = Diatomyidae, CT = Ctenodactylidae, TH = Thryonomyidae, PE = Petromuridae, CU = Cuniculidae, DASYPROC = Dasyproctidae, DI = Dinomyidae, CHINCHILLID = Chinchillidae. Bootstrap for all nodes and topology can be found in Additional file 14.
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Fabre et al. BMC Evolutionary Biology 2012 12:88 doi:10.1186/1471-2148-12-88