Table 6 |
||
| Population structure ofBlumeria graminisby geographic region, host origin and pathogenicity | ||
| Populations compareda | Snnb | HSTc |
| By geographic region | ||
| Region A (36) vs. region B (14) vs. region C (10) vs. region D (6) | 0.5468* | 0.0469** |
| By host origin | ||
| triticale (33) vs. wheat (33) | 0.8654** | 0.0397** |
| By year of collection within host origin wheat | ||
| Region D 1980’s (6) vs. Region A-B-C 2009–2010 | 0.7283ns | −0.0025ns |
| By geographic region within host origin triticale | ||
| region A (16) vs. region B (8) vs. region C (9) | 0.5899** | 0.1008** |
| region A (16) vs. region B (8) | 0.6597ns | 0.0019ns |
| region A (16) vs. region C (9) | 0.7667* | 0.1116* |
| region B (8) vs. region C (9) | 0.8677* | 0.1428* |
| By pathogenicity | ||
| Pathogenic (37) vs. non-pathogenic (29) on triticale | 0.9811** | 0.0565** |
Region A represents Belgium, region B France, region C Poland and region D Israel.
aSample sizes are in parentheses.
bSnn (the nearest neighbor statistic) measures how often the most similar sequence (or sequences) is from the same designated population. Snn has a high power with small population sizes.
cHST is a measure of population subdivision that estimates FST among populations.
P-values were estimated after 1000 permutations; nsP > 0.01; *P < 0.01; **P < 0.001.
Troch et al.
Troch et al. BMC Evolutionary Biology 2012 12:76 doi:10.1186/1471-2148-12-76