Email updates

Keep up to date with the latest news and content from BMC Evolutionary Biology and BioMed Central.

Open Access Highly Accessed Research article

The evolution of ultraconserved elements with different phylogenetic origins

Taewoo Ryu12*, Loqmane Seridi12 and Timothy Ravasi12*

Author Affiliations

1 Integrative Systems Biology Lab., Division of Biological and Environmental Sciences & Engineering, Division of Applied Mathematics and Computer Sciences, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Kingdom of Saudi Arabia

2 Department of Medicine, Division of Medical Genetics, University of California, San Diego, 9500 Gilman Drive La Jolla, CA, 92093-0688, USA

For all author emails, please log on.

BMC Evolutionary Biology 2012, 12:236  doi:10.1186/1471-2148-12-236

Published: 5 December 2012

Additional files

Additional file 1:

UCR information (≥50 bp) for each species.

Format: XLSX Size: 331KB Download file

Open Data

Additional file 2:

Short UCR information (≥30 bp) for each species.

Format: XLSX Size: 1.4MB Download file

Open Data

Additional file 3:

Comparison between identified UCRs and previously known fruit fly UCEs.

Format: XLSX Size: 52KB Download file

Open Data

Additional file 4:

Clustering results of UCRs with 50 bp flanking sequences.

Format: XLSX Size: 93KB Download file

Open Data

Additional file 5:

Visualization of the UCE clusters by minimum cuvilinear embedding.

Format: AVI Size: 8.7MB Download file

Playing the movie within this page requires QuickTime 3 or later and JavaScript. Read more

Open Data

Additional file 6:

Distribution of scaffold length for non-model species.

Format: PDF Size: 2MB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 7:

Gene ontology enrichment of nearby genes within 50 kb, 100 kb, and 200 kb from short UCRs. Only biological process terms are used.

Format: XLSX Size: 227KB Download file

Open Data

Additional file 8:

Gene ontology enrichment of nearby genes within 50 kb, 100 kb, and 200 kb from UCRs. Only biological process terms are used.

Format: XLSX Size: 62KB Download file

Open Data