The evolution of ultraconserved elements with different phylogenetic origins
1 Integrative Systems Biology Lab., Division of Biological and Environmental Sciences & Engineering, Division of Applied Mathematics and Computer Sciences, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Kingdom of Saudi Arabia
2 Department of Medicine, Division of Medical Genetics, University of California, San Diego, 9500 Gilman Drive La Jolla, CA, 92093-0688, USA
BMC Evolutionary Biology 2012, 12:236 doi:10.1186/1471-2148-12-236Published: 5 December 2012
Additional file 1:
UCR information (≥50 bp) for each species.
Format: XLSX Size: 331KB Download file
Additional file 2:
Short UCR information (≥30 bp) for each species.
Format: XLSX Size: 1.4MB Download file
Additional file 3:
Comparison between identified UCRs and previously known fruit fly UCEs.
Format: XLSX Size: 52KB Download file
Additional file 4:
Clustering results of UCRs with 50 bp flanking sequences.
Format: XLSX Size: 93KB Download file
Visualization of the UCE clusters by minimum cuvilinear embedding.
Format: AVI Size: 8.7MB Download file
Additional file 6:
Distribution of scaffold length for non-model species.
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Additional file 7:
Gene ontology enrichment of nearby genes within 50 kb, 100 kb, and 200 kb from short UCRs. Only biological process terms are used.
Format: XLSX Size: 227KB Download file
Additional file 8:
Gene ontology enrichment of nearby genes within 50 kb, 100 kb, and 200 kb from UCRs. Only biological process terms are used.
Format: XLSX Size: 62KB Download file