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Open Access Highly Accessed Research article

Genome-wide analysis of putative peroxiredoxin in unicellular and filamentous cyanobacteria

Hongli Cui12, Yipeng Wang1, Yinchu Wang12 and Song Qin1*

  • * Corresponding author: Song Qin sqin@yic.ac.cn

  • † Equal contributors

Author Affiliations

1 Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Chunhui Road, Yantai 264003, People’s Republic of China

2 University of Chinese Academy of Sciences, Yuquan Road, Beijing 100049, People’s Republic of China

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BMC Evolutionary Biology 2012, 12:220  doi:10.1186/1471-2148-12-220

Published: 16 November 2012

Additional files

Additional file 1:

Table S1. Cyanobacterial genes encoding peroxiredoxin were predicted by BLAST program (BLASTp and tBLASTn). Note: “-” stands for those do not belong to PRX family. The “complete” and “in complete” present for the complete or partial of the genomes (data collected at 1 Jan, 2012). Table S2 Cyanobacterial genes encoding peroxiredoxin were predicted by hiddenMarkov model (hmmsearch). Note: “*” stands for additional genes encoding PRXs predicted basedon hmmsearch analysis. The “complete” and “in complete” present for the complete or partial of thegenomes (data collected at 1 Jan, 2012).

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Additional file 2:

Figure S1. Maximum likelihood tree of PRXs from Prx-BCP subfamily.

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Additional file 3:

Figure S2. Maximum likelihood tree of PRXs from 2-Cys subfamily.

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Additional file 4:

Figure S3. Maximum likelihood tree of PRXs from Prx-like subfamily.

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Additional file 5:

Figure S4. Maximum likelihood tree of PRXs from Prx5_like subfamily.

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Additional file 6:

Figure S5. Maximum likelihood tree of PRXs from 1-Cys subfamily.

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Additional file 7:

The translated protein sequences of 244 putative PRXs in 37 cyanobacteria.

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