Table 5

mtDNA and microsatellite diversity measures
P. panini P. panini P. panini P. panini P. manillae manillae P. manillae subniger A. waldeni A. waldeni A. waldeni A. leucocephalus
(Panay) (Negros) (Guimaras) (Masbate) (Luzon) (Polillo) (Panay) (Guimaras) (Negros) (Mindanao)
n/H 77/43 14/8 8/6 3/3 23/19 9/7 29/13 5/3 1/1 4/4
HD 0.975±0.005 0.900±0.046 0.933±0.077 1.000±0.272 0.966±0.020 0.910±0.035 0.897±0.035 0.700±0.218 1.000±0.177
ND 0.010±0.006 0.015±0.008 0.008±0.005 0.014±0.011 0.037±0.019 0.007±0.004 0.011±0.006 0.005±0.004 0.038±0.026
DM 0 7a 0 0 7b 0 0 4
loci 18 18 19 19 13 12
n 62 14 17 9 22 4
HO 0.586 ± 0.280 0.642 ± 0.236 0.547 ± 0.311 0.576 ± 0.337 0.496 ± 0.278 0.625 ± 0.271
HE 0.640 ± 0.239 0.665 ± 0.182 0.605 ± 0.280 0.578 ± 0.240 0.543 ± 0.236 0.645 ± 0.240
PA 2.111 0.611 3.789 0.737
AR 5.07 4.78 5.20 3.53 2.88 3.91

n number of samples analyzed, H number of haplotypes, HD haplotype diversity (± standard deviation, SD); ND nucleotide diversity (± SD), DM diagnostic mutations, HO mean observed heterozygosity (± SD); HE mean expected heterozygosity (± SD), PA private alleles, AR allelic richness over all loci.

a when PpNe55, 11, 40 excluded.

b when Pmm28 excluded.

Sammler et al.

Sammler et al. BMC Evolutionary Biology 2012 12:203   doi:10.1186/1471-2148-12-203

Open Data