Additional file 5.
Supplementary figure S4. Maximum likelihood trees of the genus Fusarium and its related genera inferred from 28S rDNA. The GTR + I + Γ model was used as the model of the nucleotide substitution. The nodal numbers indicate the bootstrap probability (BP; 1000 replicated). The branch lengths are proportional to the estimated number of nucleotide substitutions. The BP values more than 75% are shown on the nodes. Although the RAxML program inferred the ML tree of 28S rDNA including all 50 strains, it could not be summarized nodal BPs. Therefore, all identical sequences were excluded and remaining 31 sequences were used for the estimation of nodal BPs.
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Watanabe et al. BMC Evolutionary Biology 2011 11:322 doi:10.1186/1471-2148-11-322