Table 1 |
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|
Estimated substitution rates per gene obtained with BEAST based on fossil and biogeographic calibration points |
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|
Gene |
Mean Rate |
ucld.mean |
ucld.stdev |
Coefficient Variance |
Covariance |
|
|
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|
cox1 |
0.0125 (0.0089-0.0165) |
0.0199 (0.0136-0.0270) |
0.6668 (0.4780-0.8728) |
0.7087 (0.4823-0.9635) |
0.0254 (-0.2254-0.2960) |
|
nad1 |
0.0177 (0.0115-0.0240) |
0.0258 (0.0163-0.0362) |
0.6390 (0.4395-0.8792) |
0.6400 (0.4088-0.8978) |
0.0003 (-0.2474-0.2699) |
|
12S |
0.0087 (0.0057-0.0119) |
0.0128 (0.0080-0.0181) |
0.6950 (0.4080-1.0218) |
0.7272 (0.3649-1.1102) |
-0.0115 (-0.2637-0.2773) |
|
16-L1 |
0.0063 (0.0046-0.0082) |
0.0091 (0.0063-0.0124) |
0.5731 (0.4032-0.7500) |
0.5576 (0.3818-0.7309) |
-0.0183 (-0.02596-0.2543) |
|
h3 |
0.00108 (0.0006-0.0016) |
0.0013 (0.0007-0.0019) |
0.6450 (0.3241-1.0006) |
0.6332 (0.2918-0.9781) |
-0.0125 (-0.2216-0.2089) |
|
28S |
0.0006 (0.0003-0.0008) |
0.0011 (0.0005-0.0019) |
1.2490 (0.8895-1.6582) |
1.4518 (0.9805-1.9531) |
0.1892 (-0.0572-0.4451) |
|
|
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|
Estimations obtained under uncorrelated lognormal relaxed clock. Lower and upper bounds of the 95% HPD are indicated between brackets. Mean Rate: number of substitutions per site across the tree divided by the tree length. Ucld.mean: mean of the branches rates. |
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|
Bidegaray-Batista and Arnedo BMC Evolutionary Biology 2011 11:317 doi:10.1186/1471-2148-11-317 |
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