Open Access Open Badges Research article

Genomic lineages of Rhizobium etli revealed by the extent of nucleotide polymorphisms and low recombination

José L Acosta1*, Luis E Eguiarte2, Rosa I Santamaría1, Patricia Bustos1, Pablo Vinuesa1, Esperanza Martínez-Romero1, Guillermo Dávila1 and Víctor González1

Author Affiliations

1 Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Av. Universidad N/C Col. Chamilpa, Apdo. Postal 565-A, Cuernavaca 62210, México

2 Departamento de Ecología Evolutiva, Instituto de Ecología, Universidad Nacional Autónoma de México, CU, AP 70-275 Coyoacán, 04510 México, DF, México

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BMC Evolutionary Biology 2011, 11:305  doi:10.1186/1471-2148-11-305

Published: 17 October 2011

Additional files

Additional file 1:

Strategy for Determining SNPs. The additional file (in .pdf format) includes text and figures delineating our process for determining SNPs (parameters, paired comparisons and SNP differences). Also include the distribution of functional classes (COGs) of recombinant quartets of each draft genome and your comparison against distribution of CFN42.

Format: DOC Size: 1.5MB Download file

This file can be viewed with: Microsoft Word Viewer

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Additional file 2:

Table of genes presented in 240 shared regions. The additional file (in .xls) includes the tables of genes and your features, as name, coordinates, gi, COGs and other.

Format: XLS Size: 78KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data