Table 2

Polymorphism and sequence divergence for each locus.

Average Differences

Dxy (%)

Da (%)

ψ

ψ 1

ψ 2

ψ Shared


RPL9

LAB × RAB

3.843

0.776

0.206

0

1

13

8

LAB × R. schneideri

14.167

2.921

2.451

7

8

16

0

RAB × R. schneideri

15.081

3.115

2.288

6

20

16

1

RPL3

LAB × RAB

4.436 (4.270)*

0.670 (0.642)*

0.226 (0.227)*

0

6

14 (9)*

3

LAB × R. schneideri

10.102

1.519

1.1139

6

8

6

1

RAB × R. schneideri

9.158 (9.402)*

1.377 (1.407)*

0.982 (1.040)*

1 (5)*

17 (12)*

7

0

C-myc

LAB × RAB

0.81

0.138

0.006

0

0

7

2

LAB × R. schneideri

5.317

0.926

0.762

3

2

5

0

RAB × R. schneideri

5.270

0.918

0.736

2

8

4

1

Cyt b

LAB × RAB

7.498

2.292

1.672

4

4

10

0

LAB × R. schneideri

7.029

2.149

1.915

4

4

4

0

RAB × R. schneideri

3.258

0.996

0.479

0

8

2

2


Dxy, average pairwise number of nucleotide substitutions per site; Da, average pairwise net nucleotide divergence; ψ, number of polymorphic sites exclusive of each group or species; ψ 1; refers to the first species/group listed in each pairwise comparison.

*Removing the R. schneideri haplotypes (H13 and H14) present in three R. marina heterozygous from population CC (see Fig. 3).

Sequeira et al. BMC Evolutionary Biology 2011 11:264   doi:10.1186/1471-2148-11-264

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