Table 1 |
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|
Population statistics, diversity estimates and neutrality tests based on ITS region of calochroid taxa studied |
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|
Population statistics |
Tests of neutrality |
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|
|
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|
Species/ population |
n |
s |
h |
hd |
k |
π (SD) |
θw |
Tajima's D |
Fu and Li's D* Statistic |
Fu and Li's F* Statistic |
Fu's Fs Statistic |
|
|
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|
C. arcuatorum |
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|
Old World |
11 |
1 |
2 |
0.182 |
0.181 |
3.3 × 10-4 (2.6 × 10-4) |
6.1 × 10-4 |
-1.128 (NS) |
-1.289 (NS) |
-1.399 (NS) |
-0.410 (NS) |
|
New World |
15 |
36 |
4 |
0.685 |
12.229 |
0.021 |
0.019 |
1.635 (NS) |
1.502** |
1.502 (NS) |
9.684 (NS) |
|
Mountain USA |
2 |
0 |
1 |
0.000 |
0.000 |
0.000 |
0.000 |
ND |
ND |
ND |
ND |
|
Pacific USA |
10 |
20 |
2 |
0.356 |
7.111 |
0.013 (5.6 × 10-3) |
0.013 |
0.027 (NS) |
1.567** |
1.326 (NS) |
9.432 (NS) |
|
Costa Rica |
3 |
0 |
1 |
0.000 |
0.000 |
0.000 |
0.000 |
ND |
ND |
ND |
ND |
|
All (l = 559) |
26 |
37 |
5 |
0.698 |
13.741 |
0.024 (1.9 × 10-3) |
0.017 |
1.569 (NS) |
1.568** |
1.843** |
13.357 (NS) |
|
C. aureofulvus |
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|
Old World |
7 |
1 |
2 |
0.571 |
0.571 |
0.001 (2.1 × 10-4) |
7.3 × 10-4 |
1.341 (NS) |
0.953 (NS) |
1.101 (NS) |
0.856 (NS) |
|
New World |
11 |
2 |
3 |
0.618 |
0.690 |
1.23 × 10-3 (2.9 × 10-4) |
1.22 × 10-3 |
0.036 (NS) |
-0.033 (NS) |
-0.269 (NS) |
-0.113 (NS) |
|
Mountain USA |
2 |
0 |
1 |
0.000 |
0.000 |
0.000 |
0.000 |
ND |
ND |
ND |
ND |
|
Pacific USA |
9 |
2 |
3 |
0.667 |
0.777 |
0.001 (3.2 × 10-4) |
0.001 |
0.195 (NS) |
-0.221 (NS) |
-0.135 (NS) |
-0.108 (NS) |
|
All (l = 560) |
18 |
4 |
5 |
0.804 |
1.346 |
0.002 (3.0 × 10-4) |
0.002 |
0.473 (NS) |
0.211 (NS) |
0.324 (NS) |
-0.505 (NS) |
|
C. elegantior |
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|
Old World |
16 |
3 |
4 |
0.442 |
0.4833 |
9 × 10-4 (3.6 × 10-4) |
0.002 |
-1.316 (NS) |
-1.122 (NS) |
-1.351 (NS) |
-1.867 (NS) |
|
New World |
67 |
7 |
7 |
0.662 |
1.003 |
0.002 (2.7 × 10-4) |
0.003 |
-0.791 (NS) |
-0.420 (NS) |
-0.638 (NS) |
-1.614 (NS) |
|
Mountain USA |
62 |
4 |
5 |
0.608 |
0.739 |
0.001 (1.8 × 10-4) |
0.002 |
-0.288 (NS) |
-0.153 (NS) |
-0.228 (NS) |
-0.753 (NS) |
|
Pacific |
5 |
1 |
2 |
0.400 |
0.400 |
7.8 × 10-4 (4.6 × 10-4) |
9.3 × 10-4 |
-0.816 (NS) |
-0.816 (NS) |
-0.771 (NS) |
0.090 (NS) |
|
All (l = 516) |
83 |
13 |
11 |
0.760 |
2.139 |
4.2 × 10-3 (4.2 × 10-4) |
0.005 |
-0.495 (NS) |
-0.782 (NS) |
-0.808 (NS) |
-1.468 (NS) |
|
C. napus |
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|
Old World |
8 |
0 |
1 |
0.000 |
0.000 |
0.000 |
0.000 |
ND |
ND |
ND |
ND |
|
New World |
19 |
2 |
3 |
0.368 |
0.385 |
6.8 × 10-4 (2.5 × 10-4) |
1.0 × 10-3 |
-0.777 |
-0.573 |
-0.720 |
-0.725 (NS) |
|
Mountain USA |
16 |
1 |
2 |
0.325 |
0.325 |
5.8 × 10-4 (2.2 × 10-4) |
5.3 × 10-4 |
0.155 (NS) |
0.688 (NS) |
0.627 (NS) |
0.551 (NS) |
|
Pacific USA |
3 |
1 |
2 |
0.667 |
0.666 |
1.1 × 10-3 (5.6 × 10-4) |
0.002 |
ND |
ND |
ND |
0.201 (NS) |
|
All (l = 564) |
27 |
2 |
3 |
0.271 |
0.279 |
5.0 × 10-4 (2.0 × 10-4) |
9.2 × 10-4 |
-0.977 (NS) |
-0.702 (NS) |
-0.898 (NS) |
-1.088 (NS) |
|
|
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|
l, nucleotide sequence length; n, sample size; s, number of segregating sites; h, haplotypes; hd, haplotype diversity; k, average number of nucleotide pair wise differences; π, number of nucleotide differences per site (SD = standard deviation of π); θw, Watterson's estimate of θ per site; ND, not determined because no polymorphism was found; NS, non-significant; **, P < 0.02. |
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|
Garnica et al. BMC Evolutionary Biology 2011 11:213 doi:10.1186/1471-2148-11-213 |
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