Additional file 1.

Collection of phylogenetic trees for Thermoprotei and Halobacteria LGT genes with strong matches. Trees for all LGT genes with BLAST scores greater than 500 in both the Thermoprotei and Halobacteria. The KEGG database three letter genome code is given before the colon and can be found here http://www.genome.jp/kegg/catalog/org_list.html webcite. The corresponding gene locus tags are provided after the colon.

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Rhodes et al. BMC Evolutionary Biology 2011 11:199   doi:10.1186/1471-2148-11-199