Table 5

Shimodaira and Hasegawa tests among individual gene trees and the two multigenic trees (supermatrix and BUCKy)

1

2

3

4

5

6

7

8

9

10

11

12

13

14

15

16

17

18

19

20

21

22

23

24

25

26

27

28


1

ns

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

2

*

ns

ns

*

*

*

*

*

*

ns

*

*

*

*

*

ns

*

*

*

*

*

*

*

*

*

*

*

*

3

*

*

ns

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

4

*

*

*

ns

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

5

*

*

ns

*

ns

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

6

*

ns

ns

*

*

ns

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

7

*

*

*

*

*

*

ns

*

*

ns

ns

*

*

*

*

*

*

*

ns

*

*

*

ns

*

*

ns

*

*

8

*

*

*

*

*

*

*

ns

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

9

*

*

*

*

*

*

*

*

ns

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

10

*

*

*

*

*

*

*

*

*

ns

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

11

*

*

*

*

*

*

*

*

*

ns

ns

*

*

*

*

ns

*

*

*

*

*

*

*

*

*

*

*

*

12

*

ns

ns

*

*

*

ns

*

*

ns

*

ns

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

13

*

*

ns

*

*

*

*

*

*

*

*

*

ns

*

*

*

*

*

*

*

*

*

*

*

*

*

ns

*

14

*

ns

ns

*

*

ns

ns

*

*

*

*

*

*

ns

*

*

ns

*

ns

*

*

*

*

*

ns

*

ns

*

15

*

ns

ns

*

*

ns

ns

*

*

*

ns

*

*

*

ns

*

ns

*

*

*

ns

*

ns

*

ns

*

ns

*

16

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

ns

*

*

*

*

*

*

*

*

*

*

*

*

17

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

ns

*

*

*

*

*

*

*

*

*

*

*

*

18

*

ns

ns

*

*

ns

*

ns

*

*

*

*

*

*

*

*

*

ns

*

*

*

*

ns

*

ns

*

*

*

19

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

ns

*

*

ns

*

*

*

*

*

*

*

*

*

20

*

*

*

*

*

*

*

*

*

ns

*

*

*

*

*

*

*

*

*

ns

*

*

*

*

*

*

*

*

21

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

ns

*

*

*

*

*

*

*

22

*

*

*

*

*

*

*

*

*

ns

*

*

*

*

*

*

*

*

*

*

*

ns

*

*

*

*

*

*

23

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

ns

*

*

*

*

*

24

*

ns

ns

*

*

*

ns

ns

*

ns

ns

*

ns

*

*

ns

*

*

ns

ns

ns

*

ns

ns

ns

*

ns

*

25

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

ns

*

*

*

26

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

ns

*

*

27

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

*

ns

*

29

*

ns

ns

*

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

30

ns

ns

ns

*

ns

ns

ns

ns

*

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

ns

*

ns

ns

ns

ns

ns

ns


Alignments are presented in columns and tree topologies in rows. *: P < 0.05; ns: P > 0.05.

(1) CRTISO; (2) eifiso4E; (3) LOC_Os01g01790; (4) LOC_Os01g09300; (5) LOC_Os01g11070; (6) LOC_Os01g13200; (7) LOC_Os01g19470; (8) LOC_Os01g21160; (9) LOC_Os01g24680; (10) LOC_Os01g37560; (11) LOC_Os01g39310; (12) LOC_Os01g48720; (13) LOC_Os01g53720; (14) LOC_Os01g55530; (15) LOC_Os01g56630; (16) LOC_Os01g60230; (17) LOC_Os01g61720; (18) LOC_Os01g62900; (19) LOC_Os01g67220; (20) LOC_Os01g68770; (21) LOC_Os01g70670; (22) LOC_Os01g72220; (23) LOC_Os01g73790; (24) MATK; (25) PinA; (26) PinB; (27) PSY2; (28) all loci; (29) supermatrix topology; (30) BUCKy topology.

Escobar et al. BMC Evolutionary Biology 2011 11:181   doi:10.1186/1471-2148-11-181

Open Data